Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 SUGT1P1-201ENST00000379514 476 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RNU6-921P-201ENST00000384361 107 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RNU1-82P-201ENST00000390851 165 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 BTBD10P2-201ENST00000404779 676 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 DPPA2P3-201ENST00000411853 655 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC004987.3-201ENST00000413879 771 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 FCF1P2-201ENST00000415284 583 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 COX6B1P1-201ENST00000415962 213 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 MRPS36P1-201ENST00000421291 307 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 Z74021.1-201ENST00000423610 407 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 USP9YP31-201ENST00000431405 881 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 NRBF2P3-201ENST00000432731 865 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 H2AFZP5-201ENST00000446960 382 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 OR1H1P-201ENST00000448731 937 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 COX6CP18-201ENST00000448769 222 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC010733.1-201ENST00000451515 401 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RPL23AP65-201ENST00000475608 468 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RPL7P16-201ENST00000479738 738 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 Y_RNA.717-201ENST00000517106 92 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC087808.1-201ENST00000520501 361 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC069366.1-201ENST00000583159 838 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC113194.1-201ENST00000606037 500 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 AC007349.4-201ENST00000608114 532 ntBASIC4.5□□□□□ -1.69
BRF2Q9HAW0 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRF2Q9HAW0 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RARSP1-201ENST00000542842 1418 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 OR52B1P-201ENST00000316506 909 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RN7SKP149-201ENST00000363008 344 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 Y_RNA.465-201ENST00000384293 102 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RNU6-441P-201ENST00000384545 106 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 MIR649-201ENST00000384843 97 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 TAS2R15P-201ENST00000390674 928 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 ERHP2-201ENST00000402323 299 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 SPTLC1P2-201ENST00000407089 121 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AL590084.1-201ENST00000407885 387 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RN7SKP267-201ENST00000410381 285 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RNA5SP113-201ENST00000410486 84 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RPL31P2-201ENST00000413849 377 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 OR4F13P-201ENST00000428478 931 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 CEACAMP9-201ENST00000442990 513 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 Z77249.1-201ENST00000444622 1175 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 BX276092.4-201ENST00000452056 248 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 USP9YP25-201ENST00000457708 443 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC010307.1-201ENST00000467206 836 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RN7SL177P-201ENST00000476596 299 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 PRELID3BP5-201ENST00000508612 460 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 MTCYBP16-201ENST00000509187 1129 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC093755.1-201ENST00000512950 1023 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC092593.2-201ENST00000513866 913 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC104057.1-201ENST00000515547 497 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 RNA5SP360-201ENST00000516555 118 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC027309.2-201ENST00000520566 192 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 LSM6P2-201ENST00000552208 177 ntBASIC4.49□□□□□ -1.69
BRF2Q9HAW0 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.49□□□□□ -1.69
BRF2Q9HAW0 GTF2IP8-201ENST00000560687 584 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms