Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 RNU1-136P-201ENST00000384181 164 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL512422.1-201ENST00000407033 553 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL450338.1-201ENST00000407987 512 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 REREP1Y-201ENST00000422655 198 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 FABP7P1-201ENST00000424004 391 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 RPL7P56-201ENST00000429441 717 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 RPL7P4-203ENST00000430239 730 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 NPM1P18-201ENST00000434232 732 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC099670.2-201ENST00000435130 321 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 REREP2Y-201ENST00000439103 200 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 RPL36AP39-201ENST00000445859 318 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 SLC31A1P1-201ENST00000451221 567 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC015724.1-201ENST00000478577 156 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC022447.3-201ENST00000506865 495 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC108064.1-201ENST00000513791 460 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 RNU6-583P-201ENST00000516012 92 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 SNORA70.20-201ENST00000516848 126 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC021678.3-201ENST00000517893 476 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC027544.3-201ENST00000535082 757 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL157687.1-201ENST00000554853 619 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL512360.1-201ENST00000555346 234 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC009852.2-201ENST00000567898 485 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC005261.5-201ENST00000596280 355 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 MEMO1P5-201ENST00000604810 406 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC069304.2-201ENST00000605154 435 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AL356274.1-201ENST00000617064 410 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AC023509.5-201ENST00000617434 807 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 AP003400.3-201ENST00000624904 346 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 MIR1321-201ENST00000637766 79 ntBASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SEC61A2Q9H9S3 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC144833.1-201ENST00000567953 4089 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ABCC13-202ENST00000463099 3842 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 MUC2-202ENST00000613187 4845 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC026523.2-201ENST00000625039 7739 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 OR4A15-201ENST00000314706 1035 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 OR52E6-202ENST00000379946 954 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 MIR130A-201ENST00000385274 89 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 HMGB1P20-201ENST00000402555 677 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 RPS20P15-201ENST00000412792 311 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AMD1P2-201ENST00000412936 992 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 RPS6P23-201ENST00000413224 722 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 FCF1P2-201ENST00000415284 583 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 SETP9-201ENST00000423837 832 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 NPM1P24-201ENST00000428039 894 ntBASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.04□□□□□ -1.6
SEC61A2Q9H9S3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms