Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC138915.4-201ENST00000565549 4147 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 TARS2P1-201ENST00000506124 2041 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 GTF2IP12-202ENST00000634317 5052 ntTSL 5 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 ASCC1-201ENST00000317126 1501 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 Y_RNA.71-201ENST00000362892 104 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 SNORA10-201ENST00000384084 133 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AL590290.1-201ENST00000405336 380 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 SPATA20P1-201ENST00000423089 438 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 CALM2P2-201ENST00000428512 440 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 FANK1-AS1-201ENST00000445458 428 ntTSL 3 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 GOT2P2-201ENST00000450663 1251 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 RN7SL251P-201ENST00000464175 297 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 Y_RNA.686-201ENST00000516548 134 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC010186.2-204ENST00000537668 439 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC092868.1-201ENST00000557949 802 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AL021918.1-201ENST00000603933 236 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 ELOCP5-201ENST00000604924 333 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 NPPA-AS1_1.1-201ENST00000622391 173 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AL136313.1-201ENST00000624804 202 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 AC093909.5-201ENST00000621839 1799 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 RNU6-651P-201ENST00000411040 105 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 EEF1A1P29-201ENST00000416082 1096 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 RPL36P18-201ENST00000419316 318 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 RPL23AP4-201ENST00000427757 463 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC073900.1-201ENST00000429766 776 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 RPL23AP60-201ENST00000450011 454 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 RPL37P6-202ENST00000464216 403 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AL161747.1-201ENST00000480068 358 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 NDUFB4P9-201ENST00000511646 388 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC112191.2-201ENST00000522428 333 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC091932.1-201ENST00000569381 427 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AL162424.1-201ENST00000602325 221 ntBASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SCAF1Q9H7N4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 SAMMSON-222ENST00000641901 2727 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 FER-202ENST00000438717 1531 ntTSL 2 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 SPATA31B1P-201ENST00000434692 4016 ntBASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 UEVLD-205ENST00000396197 4156 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC11.06□□□□□ -0.64
SCAF1Q9H7N4 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms