Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC099676.1-201ENST00000608886 657 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
VPS11Q9H270 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 AC234782.5-201ENST00000617723 324 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC5.38□□□□□ -1.55
VPS11Q9H270 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS11Q9H270 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS11Q9H270 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AP000776.1-201ENST00000530032 1663 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 AL731532.2-201ENST00000623542 1953 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 ZBTB8OSP1-201ENST00000342688 498 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 RNA5SP433-201ENST00000364491 114 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 RNU6-259P-201ENST00000383999 107 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 RPL17P50-201ENST00000396131 546 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 DBIP1-201ENST00000401435 260 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AL139098.1-201ENST00000407291 389 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 OR51A3P-201ENST00000413596 924 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 CEACAMP8-201ENST00000413902 580 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 ARPC3P1-201ENST00000437218 533 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 MTND3P1-201ENST00000441336 220 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AL450996.1-201ENST00000445574 1202 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 HMGB1P48-201ENST00000446155 598 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 NFU1P2-201ENST00000448700 469 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 MTND1P11-201ENST00000456661 876 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC092754.1-201ENST00000472975 479 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 GAPDHP39-201ENST00000481866 979 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC022133.1-201ENST00000490961 571 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 ARL2BPP4-201ENST00000506854 471 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 MTND6P2-201ENST00000512226 524 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.37□□□□□ -1.55
VPS11Q9H270 RNU6-513P-201ENST00000516104 104 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 RNU6-875P-201ENST00000516488 106 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC023632.1-201ENST00000518463 375 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 TRIM77BP-201ENST00000524985 1119 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AC005498.1-201ENST00000592125 465 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC011453.2-201ENST00000603737 729 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AP004247.3-201ENST00000608682 624 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AL592148.2-201ENST00000612210 372 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC109583.2-201ENST00000617367 129 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS11Q9H270 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 LINC01963-201ENST00000562038 3148 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 MTND4P12-201ENST00000498999 1377 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS11Q9H270 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
VPS11Q9H270 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
VPS11Q9H270 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
VPS11Q9H270 SMG1P6-201ENST00000532337 2930 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 AC100778.3-201ENST00000580060 1750 ntBASIC5.37□□□□□ -1.55
VPS11Q9H270 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VPS11Q9H270 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS11Q9H270 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 AL451142.2-201ENST00000429076 2090 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS11Q9H270 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS11Q9H270 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS11Q9H270 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
VPS11Q9H270 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS11Q9H270 RNU6-500P-201ENST00000362349 107 ntBASIC5.36□□□□□ -1.55
VPS11Q9H270 MIR621-201ENST00000384919 96 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms