Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 GABRA6-201ENST00000274545 2128 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 Y_RNA.46-201ENST00000362695 102 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RNA5SP321-201ENST00000362722 111 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RN7SKP160-201ENST00000363804 340 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-38P-201ENST00000384085 107 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RPL34P19-201ENST00000415903 342 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 OSTCP4-201ENST00000424397 449 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC083862.1-201ENST00000427378 1242 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 PTCSC2-201ENST00000430058 204 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RSU1P2-202ENST00000437884 485 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 HMGB3P11-201ENST00000440127 604 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC011742.2-201ENST00000443818 352 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AP000281.1-201ENST00000444036 316 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 DDX3P2-201ENST00000446138 111 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-333P-201ENST00000459117 107 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RPL7P5-201ENST00000471472 736 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC098847.1-201ENST00000473094 348 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 SLC25A15P5-201ENST00000508033 253 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 RNU4ATAC8P-201ENST00000516196 109 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 SNORA81.3-201ENST00000517283 198 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AP005597.2-201ENST00000526238 341 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 SNRPCP6-201ENST00000528310 210 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AP005435.4-201ENST00000529514 284 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC007537.1-201ENST00000539347 327 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC140063.1-201ENST00000541343 259 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC026956.1-201ENST00000558741 396 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC125232.2-201ENST00000592457 143 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC011468.4-201ENST00000603942 409 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AL355297.3-201ENST00000604082 446 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AL022099.1-201ENST00000604551 712 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AL591167.1-201ENST00000607321 456 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 MIR6820-201ENST00000611508 62 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC012409.4-201ENST00000612923 249 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AP000550.3-201ENST00000637734 379 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 MIR193BHG-214ENST00000641765 509 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 OR11H5P-202ENST00000641612 1325 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 C4BPAP1-201ENST00000415474 1893 ntBASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CNTNAP3Q9BZ76 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 SMG1P5-202ENST00000529428 4219 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 SMG1P2-201ENST00000566127 4221 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 AC011008.2-201ENST00000624866 3352 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 AC116158.1-201ENST00000560231 2129 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 AP000766.1-201ENST00000561746 4140 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 OR52B3P-201ENST00000314715 928 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 Y_RNA.14-201ENST00000362415 103 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 RNU6-886P-201ENST00000384319 105 ntBASIC6.37□□□□□ -1.39
CNTNAP3Q9BZ76 Y_RNA.562-201ENST00000384695 113 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms