Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RPL23AP57-201ENST00000332361 466 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 OR1AA1P-201ENST00000419597 916 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 Z75741.1-201ENST00000446793 314 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AL591623.2-201ENST00000449978 222 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 U3.44-201ENST00000458938 192 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 RPS3AP14-201ENST00000483907 780 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 OR6C71P-202ENST00000641886 1107 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SCAPERQ9BY12 UBE3AP2-201ENST00000429033 2259 ntBASIC5.44□□□□□ -1.54
SCAPERQ9BY12 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 SNORD74.4-201ENST00000364129 80 ntBASIC5.43□□□□□ -1.54
SCAPERQ9BY12 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 MIR5004-201ENST00000579078 107 ntBASIC5.43□□□□□ -1.54
SCAPERQ9BY12 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 AL354976.1-201ENST00000613843 387 ntBASIC5.43□□□□□ -1.54
SCAPERQ9BY12 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SCAPERQ9BY12 AL034403.1-201ENST00000399414 885 ntBASIC5.42□□□□□ -1.54
SCAPERQ9BY12 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 UBA52P3-201ENST00000491303 382 ntBASIC5.42□□□□□ -1.54
SCAPERQ9BY12 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 IGHV3-32-201ENST00000519182 355 ntBASIC5.42□□□□□ -1.54
SCAPERQ9BY12 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 U4.6-201ENST00000621618 127 ntBASIC5.42□□□□□ -1.54
SCAPERQ9BY12 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 USP8P1-201ENST00000494673 3183 ntBASIC5.42□□□□□ -1.54
SCAPERQ9BY12 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SCAPERQ9BY12 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 AC005332.5-201ENST00000591222 2919 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 ELOCP8-201ENST00000439309 332 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 TPTE2P3-201ENST00000441562 1189 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 ELOCP15-201ENST00000442090 332 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 HMGB3P13-201ENST00000511263 607 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 AC023161.2-201ENST00000551218 780 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 MIR5680-201ENST00000577577 84 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 AL133247.2-201ENST00000603236 482 ntBASIC5.41□□□□□ -1.54
SCAPERQ9BY12 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
SCAPERQ9BY12 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SCAPERQ9BY12 RN7SKP247-201ENST00000411094 308 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.4□□□□□ -1.54
SCAPERQ9BY12 NANOGP6-201ENST00000429190 847 ntBASIC5.4□□□□□ -1.54
SCAPERQ9BY12 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms