Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL163642.2-201ENST00000604722 1019 ntBASIC4.66□□□□□ -1.66
ABCA3Q99758 AC128687.2-201ENST00000609657 566 ntBASIC4.66□□□□□ -1.66
ABCA3Q99758 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ABCA3Q99758 AC008079.2-201ENST00000623543 20396 ntBASIC4.65□□□□□ -1.66
ABCA3Q99758 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.65□□□□□ -1.66
ABCA3Q99758 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCA3Q99758 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
ABCA3Q99758 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ABCA3Q99758 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.65□□□□□ -1.66
ABCA3Q99758 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ABCA3Q99758 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCA3Q99758 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.65□□□□□ -1.66
ABCA3Q99758 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
ABCA3Q99758 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
ABCA3Q99758 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
ABCA3Q99758 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.65□□□□□ -1.67
ABCA3Q99758 UBE2V1P2-201ENST00000397758 440 ntBASIC4.65□□□□□ -1.67
ABCA3Q99758 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 AC107083.1-201ENST00000439643 279 ntBASIC4.65□□□□□ -1.67
ABCA3Q99758 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 AC119744.1-201ENST00000454746 1715 ntBASIC4.65□□□□□ -1.67
ABCA3Q99758 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.65□□□□□ -1.67
ABCA3Q99758 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.65□□□□□ -1.67
ABCA3Q99758 TRBV12-2-201ENST00000489763 344 ntBASIC4.65□□□□□ -1.67
ABCA3Q99758 AC023141.12-201ENST00000512399 199 ntBASIC4.65□□□□□ -1.67
ABCA3Q99758 AL451007.1-201ENST00000595491 289 ntBASIC4.65□□□□□ -1.67
ABCA3Q99758 AL732618.1-201ENST00000623251 301 ntBASIC4.65□□□□□ -1.67
ABCA3Q99758 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
ABCA3Q99758 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.64□□□□□ -1.67
ABCA3Q99758 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.64□□□□□ -1.67
ABCA3Q99758 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
ABCA3Q99758 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 SNORA80A-201ENST00000363922 136 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 SNORA54-201ENST00000384281 123 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 RNU6-729P-201ENST00000384399 107 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 HDGFP1-201ENST00000405943 252 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.64□□□□□ -1.67
ABCA3Q99758 HIGD1AP12-201ENST00000427832 281 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.64□□□□□ -1.67
ABCA3Q99758 RPL7L1P13-201ENST00000511702 739 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 IGKV2-26-201ENST00000518305 343 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 AC018442.3-201ENST00000523025 183 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.64□□□□□ -1.67
ABCA3Q99758 KLKP1-201ENST00000595979 403 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
ABCA3Q99758 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
ABCA3Q99758 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
ABCA3Q99758 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
ABCA3Q99758 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.64□□□□□ -1.67
ABCA3Q99758 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
ABCA3Q99758 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
ABCA3Q99758 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 RPL23AP69-201ENST00000431134 458 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCA3Q99758 RPS29P31-201ENST00000446147 164 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 AC099563.1-201ENST00000456086 418 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCA3Q99758 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCA3Q99758 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
ABCA3Q99758 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCA3Q99758 DDX18P4-201ENST00000511690 1966 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
ABCA3Q99758 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCA3Q99758 AC007390.2-201ENST00000606229 3803 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCA3Q99758 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCA3Q99758 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
ABCA3Q99758 HLFP1-201ENST00000402375 499 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 NPM1P38-201ENST00000403835 865 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 RNA5SP229-201ENST00000410809 99 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 AL160175.1-201ENST00000428124 247 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 AL158071.1-201ENST00000430315 461 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 MOB1AP1-201ENST00000430903 535 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.63□□□□□ -1.67
ABCA3Q99758 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.63□□□□□ -1.67
ABCA3Q99758 AC004024.1-201ENST00000549244 247 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 AL121603.1-201ENST00000553815 142 ntBASIC4.63□□□□□ -1.67
ABCA3Q99758 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.63□□□□□ -1.67
ABCA3Q99758 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCA3Q99758 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.63□□□□□ -1.67
ABCA3Q99758 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
ABCA3Q99758 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.62□□□□□ -1.67
ABCA3Q99758 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.62□□□□□ -1.67
ABCA3Q99758 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ABCA3Q99758 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ABCA3Q99758 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.62□□□□□ -1.67
ABCA3Q99758 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ABCA3Q99758 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms