Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
IFT140Q96RY7 FRG1CP-201ENST00000358464 769 ntBASIC5.82□□□□□ -1.48
IFT140Q96RY7 RNU6-7-201ENST00000364784 107 ntBASIC5.82□□□□□ -1.48
IFT140Q96RY7 RNU6-8-201ENST00000365467 107 ntBASIC5.82□□□□□ -1.48
IFT140Q96RY7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.82□□□□□ -1.48
IFT140Q96RY7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.82□□□□□ -1.48
IFT140Q96RY7 PTP4A1P3-201ENST00000433661 420 ntBASIC5.82□□□□□ -1.48
IFT140Q96RY7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.82□□□□□ -1.48
IFT140Q96RY7 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.82□□□□□ -1.48
IFT140Q96RY7 AC073657.2-201ENST00000605661 303 ntBASIC5.82□□□□□ -1.48
IFT140Q96RY7 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.82□□□□□ -1.48
IFT140Q96RY7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT140Q96RY7 IPO8P1-201ENST00000455509 3109 ntBASIC5.82□□□□□ -1.48
IFT140Q96RY7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.82□□□□□ -1.48
IFT140Q96RY7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
IFT140Q96RY7 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
IFT140Q96RY7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
IFT140Q96RY7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 AL645937.1-201ENST00000641739 1652 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 MTHFD2P2-201ENST00000407725 247 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 GNG5P5-201ENST00000420444 220 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 HLA-N-201ENST00000437516 135 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 RPL7P48-201ENST00000461513 746 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 AC005476.1-201ENST00000554427 397 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 MIR3162-201ENST00000581818 82 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
IFT140Q96RY7 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 AL355596.1-201ENST00000565399 3996 ntBASIC5.81□□□□□ -1.48
IFT140Q96RY7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.81□□□□□ -1.48
IFT140Q96RY7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
IFT140Q96RY7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
IFT140Q96RY7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
IFT140Q96RY7 MIR422A-201ENST00000362286 90 ntBASIC5.8□□□□□ -1.48
IFT140Q96RY7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 NDUFB1P1-201ENST00000435191 180 ntBASIC5.8□□□□□ -1.48
IFT140Q96RY7 AC069285.2-201ENST00000440210 275 ntBASIC5.8□□□□□ -1.48
IFT140Q96RY7 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
IFT140Q96RY7 AC006363.1-201ENST00000603806 463 ntBASIC5.8□□□□□ -1.48
IFT140Q96RY7 AP003392.5-201ENST00000607857 415 ntBASIC5.8□□□□□ -1.48
IFT140Q96RY7 AC009464.1-201ENST00000615731 469 ntBASIC5.8□□□□□ -1.48
IFT140Q96RY7 MIR7154-201ENST00000620673 73 ntBASIC5.8□□□□□ -1.48
IFT140Q96RY7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
IFT140Q96RY7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.8□□□□□ -1.48
IFT140Q96RY7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT140Q96RY7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT140Q96RY7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 SNORA5B-201ENST00000363786 132 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 SNORA48.8-201ENST00000391324 134 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 NPM1P48-201ENST00000436002 853 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 RPS29P31-201ENST00000446147 164 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 RNU6-513P-201ENST00000516104 104 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 AC023389.2-201ENST00000580031 955 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 AC026979.4-201ENST00000606555 645 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
IFT140Q96RY7 AC027290.2-201ENST00000623210 18662 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.79□□□□□ -1.48
IFT140Q96RY7 HSPA8P17-201ENST00000427029 1382 ntBASIC5.79□□□□□ -1.48
IFT140Q96RY7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT140Q96RY7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
IFT140Q96RY7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
IFT140Q96RY7 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
IFT140Q96RY7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 MIR449A-201ENST00000362113 91 ntBASIC5.78□□□□□ -1.48
IFT140Q96RY7 ARF4P3-201ENST00000397387 509 ntBASIC5.78□□□□□ -1.48
IFT140Q96RY7 AC063979.1-201ENST00000415539 377 ntBASIC5.78□□□□□ -1.48
IFT140Q96RY7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 AC098824.1-201ENST00000453565 980 ntBASIC5.78□□□□□ -1.48
IFT140Q96RY7 AC004924.1-201ENST00000480160 781 ntBASIC5.78□□□□□ -1.48
IFT140Q96RY7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 SUMO2P20-201ENST00000520803 283 ntBASIC5.78□□□□□ -1.48
IFT140Q96RY7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC5.78□□□□□ -1.48
IFT140Q96RY7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms