Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SHKBP1Q8TBC3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SHKBP1Q8TBC3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.06□□□□□ -1.44
SHKBP1Q8TBC3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL049634.1-201ENST00000453770 1720 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 LINC02019-201ENST00000608605 2060 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 MSL3P1-202ENST00000440028 1468 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 OR9K1P-201ENST00000326513 941 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL159987.1-201ENST00000347911 293 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 RNU6-462P-201ENST00000362659 105 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 U8.3-201ENST00000363321 132 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 RNU6-533P-201ENST00000384144 107 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 RNU4-31P-201ENST00000384211 141 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 RNU6-784P-201ENST00000384330 106 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 PEX12P1-201ENST00000400284 1048 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 RNU2-62P-201ENST00000410868 191 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL358176.2-201ENST00000425769 204 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 MTCO3P46-201ENST00000425787 232 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL445669.1-201ENST00000426743 755 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL590399.2-201ENST00000427536 309 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL731534.1-201ENST00000434711 269 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC139365.2-201ENST00000517972 253 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC025260.1-201ENST00000548858 430 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 DNAJC8P1-201ENST00000554535 372 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL845331.3-202ENST00000562856 261 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 MIR3682-201ENST00000581338 84 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC100830.2-201ENST00000581636 240 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC011816.2-201ENST00000607089 556 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC004908.2-201ENST00000609090 574 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 U6.107-201ENST00000637108 79 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 RLIMP2-201ENST00000427891 1563 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 GTF2IP4-201ENST00000453092 2054 ntBASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SHKBP1Q8TBC3 AC107982.1-201ENST00000507171 1300 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 OR5BR1P-201ENST00000524992 1330 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC109446.4-201ENST00000623235 2755 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 RNU6-1339P-201ENST00000363574 91 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 RNU6-1322P-201ENST00000364309 107 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 RPL35AP12-201ENST00000425362 338 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 ISCA1P6-201ENST00000427740 390 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 DYNLL1P7-201ENST00000429273 258 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 RPL7P54-201ENST00000438336 674 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 MTND6P18-201ENST00000439477 513 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AL390119.1-201ENST00000440329 312 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AL353093.1-201ENST00000441292 436 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 CBWD4P-201ENST00000445695 655 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 RPL7P12-201ENST00000446719 750 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC132479.1-201ENST00000449160 144 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AC104306.1-201ENST00000449702 371 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 DNAJB5P1-201ENST00000454004 806 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 HSPE1P22-201ENST00000456856 327 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 Y_RNA.639-201ENST00000458981 102 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 Y_RNA.631-201ENST00000459607 101 ntBASIC6.04□□□□□ -1.44
SHKBP1Q8TBC3 AL133445.1-201ENST00000467051 452 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms