Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RPS3P2-201ENST00000421346 701 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC007559.1-201ENST00000428736 355 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC109583.1-201ENST00000432156 268 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC023347.2-201ENST00000433994 462 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 RPL23AP33-201ENST00000442301 452 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 TPT1P12-201ENST00000448968 492 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 RPL7P9-201ENST00000468715 747 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AL136126.1-201ENST00000473603 402 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 RN7SL30P-201ENST00000488416 306 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 KLHL2P1-201ENST00000508691 521 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC004980.4-201ENST00000513375 203 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC078899.3-201ENST00000599065 212 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AL591926.1-201ENST00000620542 217 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AP000676.4-201ENST00000624659 623 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 AC136428.4-201ENST00000634254 1155 ntBASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SPTSSBQ8NFR3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RN7SKP275-201ENST00000364626 301 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RNA5SP510-201ENST00000364697 99 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RNU6-532P-201ENST00000384318 107 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RNU1-101P-201ENST00000391171 127 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 CHMP1B2P-201ENST00000399581 597 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL590290.1-201ENST00000405336 380 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL583834.1-201ENST00000406943 343 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 MIR1275-201ENST00000408770 80 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RNA5SP231-201ENST00000410496 138 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL139281.1-201ENST00000422120 335 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 OR8F1P-201ENST00000425243 930 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AP000907.1-201ENST00000428428 510 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 NFYAP1-201ENST00000431953 972 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 ELOCP11-201ENST00000436690 332 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 ELOCP16-201ENST00000444494 332 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RPS17P13-201ENST00000448974 407 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC140076.1-201ENST00000449897 361 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RPL36AP33-201ENST00000450395 310 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC144530.1-201ENST00000452862 555 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 NECAP1P2-201ENST00000455668 727 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RPS20P21-201ENST00000466859 343 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RPL21P18-201ENST00000469899 480 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC022336.1-201ENST00000475510 337 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 HMGB1P38-201ENST00000490557 577 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RN7SL649P-201ENST00000496974 275 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 RNU7-143P-201ENST00000516781 65 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC104986.1-201ENST00000517978 436 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC116917.1-201ENST00000520558 305 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC245166.1-201ENST00000521012 253 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 IGKV2-4-201ENST00000523070 340 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 MTCYBP41-201ENST00000528913 1123 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms