Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 HNRNPCP4-201ENST00000571636 900 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 RPL23AP87-202ENST00000573039 466 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC012417.1-201ENST00000582307 1039 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC110743.1-201ENST00000584870 478 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 CCDC58P3-201ENST00000590792 430 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC068020.1-201ENST00000594215 661 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 AL034351.1-201ENST00000605288 668 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 NCAPGP1-201ENST00000505112 1814 ntBASIC3.78□□□□□ -1.8
RAB43Q86YS6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RAB43Q86YS6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.78□□□□□ -1.8
RAB43Q86YS6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAB43Q86YS6 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAB43Q86YS6 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 RNU6-304P-201ENST00000364855 107 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 RNA5SP97-201ENST00000365006 84 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AL389915.1-201ENST00000422463 466 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC087650.1-201ENST00000431445 468 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AL035246.1-201ENST00000433554 1255 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 ARL4AP4-201ENST00000434170 518 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 RNU6-1218P-201ENST00000458990 108 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 RPL5P13-201ENST00000462840 709 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RAB43Q86YS6 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC034244.2-201ENST00000514668 858 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 RN7SKP141-201ENST00000516167 338 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 DEFB109D-201ENST00000529497 240 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 CYCSP30-201ENST00000546447 172 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 MIR4644-201ENST00000579929 84 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC244505.7-201ENST00000599675 272 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC112230.1-201ENST00000604342 547 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 HMGB1P51-201ENST00000605166 638 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC005021.1-201ENST00000608730 355 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC019080.5-201ENST00000624891 757 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.77□□□□□ -1.81
RAB43Q86YS6 OR8B1P-202ENST00000641132 1178 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RAB43Q86YS6 AC100871.1-201ENST00000507871 1456 ntBASIC3.77□□□□□ -1.81
RAB43Q86YS6 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RAB43Q86YS6 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 AC009229.4-201ENST00000623854 1947 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 RNU1-87P-201ENST00000363727 170 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
RAB43Q86YS6 RNU6-1279P-201ENST00000383917 103 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 MIR670-201ENST00000390142 98 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 RNA5SP239-201ENST00000410218 129 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 SNORA57.3-201ENST00000411095 141 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 AC018644.1-201ENST00000429934 551 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 AL358472.1-201ENST00000431295 329 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 AC009263.1-201ENST00000441193 1239 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 AL133547.1-201ENST00000448546 220 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 AL645939.1-201ENST00000453429 797 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 OR9M1P-201ENST00000459641 921 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 RNU7-143P-201ENST00000516781 65 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 AC067904.2-201ENST00000517322 1283 ntBASIC3.76□□□□□ -1.81
RAB43Q86YS6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.76□□□□□ -1.81
RAB43Q86YS6 OR7E10P-201ENST00000526420 991 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms