Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC005831.1-201ENST00000624384 1697 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC073508.1-201ENST00000428866 656 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC079089.3-201ENST00000603094 673 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 MAPK10-322ENST00000641485 4530 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC068647.1-201ENST00000489539 2265 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 AL691447.1-201ENST00000419456 387 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 OR6K4P-201ENST00000423179 955 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 BX119904.1-201ENST00000432026 348 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 MRPS33P4-201ENST00000434892 317 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 NPM1P48-201ENST00000436002 853 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 TRBV12-2-201ENST00000489763 344 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 AL133457.1-201ENST00000564251 987 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 MRPS21P9-201ENST00000571150 257 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 HCFC2P1-201ENST00000392864 1592 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13CQ709C8 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 RNA5SP235-201ENST00000365411 114 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 NPM1P17-201ENST00000479221 602 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 DUXAP6-201ENST00000553858 601 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 MIR7843-201ENST00000622274 79 ntBASIC2.79□□□□□ -1.96
VPS13CQ709C8 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VPS13CQ709C8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 MIR1261-201ENST00000408659 82 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 AL513175.1-201ENST00000431492 780 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 AC108022.1-201ENST00000493466 478 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 OR4A12P-201ENST00000530847 918 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 OR5H2-201ENST00000355273 945 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 FDX1P2-201ENST00000450769 375 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 AC068020.1-201ENST00000594215 661 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 SLC31A1P1-201ENST00000451221 567 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13CQ709C8 AC093755.1-201ENST00000512950 1023 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 HIGD1AP1-201ENST00000550979 275 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13CQ709C8 MIR3936-201ENST00000584304 110 ntBASIC2.78□□□□□ -1.96
VPS13CQ709C8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 MAPRE1P3-201ENST00000435438 796 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC023598.1-201ENST00000472521 361 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 HMGB3P13-201ENST00000511263 607 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 AC090312.2-201ENST00000582687 378 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 SNORD91B-202ENST00000608459 222 ntBASIC2.77□□□□□ -1.97
VPS13CQ709C8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
VPS13CQ709C8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS13CQ709C8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms