Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 ARL4AP3-201ENST00000441452 574 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 UBE2D3P4-201ENST00000441973 436 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC004865.1-201ENST00000442276 1003 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 GTF3AP5-201ENST00000442645 697 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC118469.1-201ENST00000442943 488 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AL354714.3-201ENST00000447284 493 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 OR1H1P-201ENST00000448731 937 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 RFC5P1-201ENST00000454419 874 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC010326.1-201ENST00000462726 602 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 RN7SL443P-201ENST00000464331 290 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC103987.1-201ENST00000473394 348 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 RN7SKP92-201ENST00000517266 244 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 ELOCP32-201ENST00000548625 324 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 RN7SL290P-201ENST00000578661 300 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 RN7SL435P-201ENST00000584418 282 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 VIS1.1-201ENST00000610517 203 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC022106.2-201ENST00000620114 757 ntBASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A4Q53GD3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 SGO1P2-201ENST00000429458 1589 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 RN7SKP153-201ENST00000365026 316 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 VDAC2P1-201ENST00000399358 958 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 Y_RNA.599-201ENST00000410489 109 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 RNU2-42P-201ENST00000410697 113 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 RNU6-272P-201ENST00000411028 104 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC124944.2-201ENST00000429866 1242 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AL445567.1-201ENST00000439121 144 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC016772.1-201ENST00000444170 1261 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 MTND2P4-201ENST00000445034 1004 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 IGHV5-78-201ENST00000450948 295 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 MTCO3P16-201ENST00000454456 754 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 MTND4LP3-201ENST00000468320 276 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 RPS3AP43-201ENST00000479743 781 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC005832.3-201ENST00000537929 631 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC090888.1-201ENST00000561335 1141 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC136624.4-201ENST00000573044 370 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 OR2AS2P-201ENST00000606902 342 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC090246.1-201ENST00000616499 426 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AC007671.2-201ENST00000637344 619 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AL353743.4-201ENST00000422653 1547 ntBASIC5.18□□□□□ -1.58
SLC44A4Q53GD3 AP000526.1-201ENST00000603308 1388 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC093536.2-201ENST00000565257 1406 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 MUC2-202ENST00000613187 4845 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 AC099654.2-201ENST00000433031 1980 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 ELL2P3-201ENST00000457883 1602 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 OR56B2P-201ENST00000317102 954 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 RNU6-582P-201ENST00000362989 107 ntBASIC5.17□□□□□ -1.58
SLC44A4Q53GD3 RNU4-24P-201ENST00000364565 139 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms