Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.65□□□□□ -1.83
RFX4Q33E94 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.65□□□□□ -1.83
RFX4Q33E94 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.65□□□□□ -1.83
RFX4Q33E94 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.65□□□□□ -1.83
RFX4Q33E94 AC104785.1-201ENST00000603220 588 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AL356218.2-201ENST00000605264 187 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 RNVU1-4-201ENST00000612985 164 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AC025016.1-201ENST00000616746 682 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AL139089.1-201ENST00000620372 975 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFX4Q33E94 PRO1804-201ENST00000623780 2050 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFX4Q33E94 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFX4Q33E94 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 AC100871.1-201ENST00000507871 1456 ntBASIC3.65□□□□□ -1.83
RFX4Q33E94 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
RFX4Q33E94 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFX4Q33E94 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFX4Q33E94 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.64□□□□□ -1.83
RFX4Q33E94 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 OR4K17-201ENST00000315543 1032 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 RNA5SP366-201ENST00000365454 123 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AL161909.1-201ENST00000397390 712 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 RPS27AP11-201ENST00000402798 447 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.64□□□□□ -1.83
RFX4Q33E94 RPL26P29-201ENST00000415623 438 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 RPS12P23-201ENST00000419579 400 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AL732292.1-201ENST00000426692 226 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AC017083.1-201ENST00000428093 483 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.64□□□□□ -1.83
RFX4Q33E94 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 BTF3P10-201ENST00000433415 495 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 ACTR3P2-201ENST00000439585 1257 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 SBDSP1-204ENST00000453858 737 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 RPL5P32-201ENST00000454085 879 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AC011276.1-201ENST00000469688 323 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 RN7SL303P-201ENST00000469773 251 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AC041039.1-201ENST00000485656 536 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 CDH12P4-201ENST00000517835 295 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 CDH12P3-201ENST00000517935 295 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 CDH12P1-201ENST00000518435 295 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC090877.1-201ENST00000561418 344 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC069366.1-201ENST00000583159 838 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 MIR5096-201ENST00000583713 70 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 AL356490.1-201ENST00000623079 479 ntBASIC3.64□□□□□ -1.83
RFX4Q33E94 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.64□□□□□ -1.83
RFX4Q33E94 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFX4Q33E94 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RFX4Q33E94 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
RFX4Q33E94 AC009501.3-201ENST00000605001 1352 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 EXOC5P1-201ENST00000510543 1969 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFX4Q33E94 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.63□□□□□ -1.83
RFX4Q33E94 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
RFX4Q33E94 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 RNA5SP509-201ENST00000364577 119 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 U3.15-201ENST00000365398 212 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 MIR937-201ENST00000401271 86 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.63□□□□□ -1.83
RFX4Q33E94 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.63□□□□□ -1.83
RFX4Q33E94 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.63□□□□□ -1.83
RFX4Q33E94 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.63□□□□□ -1.83
RFX4Q33E94 AC009480.2-201ENST00000422916 432 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 DNAJC19P7-201ENST00000428811 344 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.63□□□□□ -1.83
RFX4Q33E94 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.63□□□□□ -1.83
RFX4Q33E94 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.63□□□□□ -1.83
RFX4Q33E94 MTCYBP12-201ENST00000440559 1134 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 RPS4XP4-201ENST00000443195 763 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 AC023512.1-201ENST00000444513 499 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.63□□□□□ -1.83
RFX4Q33E94 RPS17P13-201ENST00000448974 407 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.63□□□□□ -1.83
RFX4Q33E94 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.63□□□□□ -1.83
RFX4Q33E94 SNRPGP5-201ENST00000456003 220 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 RPL38P1-201ENST00000460914 211 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RFX4Q33E94 AC107398.1-201ENST00000486904 505 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.63□□□□□ -1.83
RFX4Q33E94 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms