Protein–RNA interactions for Protein: Q2TBA0

KLHL40, Kelch-like protein 40, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL40Q2TBA0 AL391834.1-201ENST00000609609 560 ntBASIC4.32□□□□□ -1.72
KLHL40Q2TBA0 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLHL40Q2TBA0 AC073530.2-201ENST00000623987 261 ntBASIC4.32□□□□□ -1.72
KLHL40Q2TBA0 AC010608.2-201ENST00000624830 470 ntBASIC4.32□□□□□ -1.72
KLHL40Q2TBA0 CDRT1-208ENST00000630868 794 ntBASIC4.32□□□□□ -1.72
KLHL40Q2TBA0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
KLHL40Q2TBA0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC009951.1-201ENST00000623674 2614 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AL121657.1-201ENST00000327215 531 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AP002088.1-201ENST00000382740 395 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 MIR320B1-201ENST00000390209 79 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 LIPT1P1-201ENST00000415870 1186 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 RPL31P12-201ENST00000422587 358 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 NPM1P24-201ENST00000428039 894 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC074367.1-201ENST00000438685 1125 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 HMGB3P8-201ENST00000449709 577 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC006480.1-201ENST00000449887 378 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 RPL7P31-201ENST00000450192 724 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 NUTF2P7-201ENST00000453086 375 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 RPL5P13-201ENST00000462840 709 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC110768.1-201ENST00000509222 400 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AP003730.1-201ENST00000524605 285 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AP001636.2-201ENST00000525517 696 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 NPM1P47-201ENST00000560843 856 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC115621.1-201ENST00000604653 858 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC092653.1-201ENST00000608509 531 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC023043.4-201ENST00000612081 449 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC067852.7-201ENST00000623270 535 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC119674.1-212ENST00000641155 993 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 AC087565.3-202ENST00000642085 1603 ntBASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.31□□□□□ -1.72
KLHL40Q2TBA0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 RNA5SP42-201ENST00000364278 115 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 RNU6-532P-201ENST00000384318 107 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 SNORA70C-201ENST00000384538 135 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 RNU6-55P-201ENST00000411092 107 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 RNU6-954P-201ENST00000411355 107 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 AL158071.1-201ENST00000430315 461 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 AC010401.1-201ENST00000463867 348 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 RPL7L1P8-201ENST00000469911 741 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 AC006960.3-201ENST00000561845 705 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 AC022884.3-201ENST00000579571 248 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 MIR4512-201ENST00000583257 77 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 uc_338.9-201ENST00000617424 182 ntBASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.3□□□□□ -1.72
KLHL40Q2TBA0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 RN7SKP227-201ENST00000364445 330 ntBASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 AC245517.2-201ENST00000442890 346 ntBASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 AC006539.3-201ENST00000454258 129 ntBASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 RNU7-27P-201ENST00000459281 62 ntBASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 AC010468.1-201ENST00000461022 817 ntBASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 RPL6P9-201ENST00000466502 859 ntBASIC4.29□□□□□ -1.72
KLHL40Q2TBA0 CYCSP20-201ENST00000473154 315 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms