Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.38□□□□□ -1.71
SCN7AQ01118 NCAPGP2-201ENST00000557911 754 ntBASIC4.38□□□□□ -1.71
SCN7AQ01118 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN7AQ01118 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SCN7AQ01118 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SCN7AQ01118 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCN7AQ01118 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
SCN7AQ01118 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN7AQ01118 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.37□□□□□ -1.71
SCN7AQ01118 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SCN7AQ01118 RNA5SP42-201ENST00000364278 115 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN7AQ01118 MTHFD2P2-201ENST00000407725 247 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN7AQ01118 AJ239321.1-201ENST00000424255 564 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 ELOCP18-201ENST00000434209 337 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.37□□□□□ -1.71
SCN7AQ01118 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN7AQ01118 RPS3AP14-201ENST00000483907 780 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN7AQ01118 AC008489.1-201ENST00000524271 483 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 AC103968.1-201ENST00000557841 573 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 HMGN2P47-201ENST00000559378 272 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.37□□□□□ -1.71
SCN7AQ01118 MTCO1P46-201ENST00000451639 1491 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 AL645937.1-201ENST00000641739 1652 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN7AQ01118 AC092435.3-201ENST00000565538 3654 ntBASIC4.37□□□□□ -1.71
SCN7AQ01118 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCN7AQ01118 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SCN7AQ01118 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN7AQ01118 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCN7AQ01118 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.37□□□□□ -1.71
SCN7AQ01118 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SCN7AQ01118 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN7AQ01118 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
SCN7AQ01118 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SCN7AQ01118 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN7AQ01118 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN7AQ01118 OR10J6P-201ENST00000289731 930 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
SCN7AQ01118 U3.19-201ENST00000390893 196 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 RNA5SP39-201ENST00000411245 120 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 NANOGNBP1-201ENST00000448444 480 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 NPM1P39-201ENST00000449818 867 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 RPL7P38-201ENST00000488396 739 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.36□□□□□ -1.71
SCN7AQ01118 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN7AQ01118 AC024224.1-201ENST00000538284 609 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.36□□□□□ -1.71
SCN7AQ01118 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.36□□□□□ -1.71
SCN7AQ01118 AC067852.3-201ENST00000589177 561 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 AC124312.4-201ENST00000605533 310 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 MIR486-1-201ENST00000612171 68 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 PCA3_2.1-201ENST00000612507 409 ntBASIC4.36□□□□□ -1.71
SCN7AQ01118 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN7AQ01118 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.36□□□□□ -1.71
SCN7AQ01118 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.36□□□□□ -1.71
SCN7AQ01118 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCN7AQ01118 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SCN7AQ01118 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.36□□□□□ -1.71
SCN7AQ01118 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
SCN7AQ01118 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN7AQ01118 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN7AQ01118 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN7AQ01118 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCN7AQ01118 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN7AQ01118 AC063979.1-201ENST00000415539 377 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN7AQ01118 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.35□□□□□ -1.71
SCN7AQ01118 AC012123.2-201ENST00000485809 248 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.35□□□□□ -1.71
SCN7AQ01118 AC009237.17-201ENST00000618111 748 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 DDX6P1-205ENST00000441966 1436 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 AC007656.2-201ENST00000624902 4547 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN7AQ01118 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SCN7AQ01118 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SCN7AQ01118 AC093849.1-201ENST00000563631 2209 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN7AQ01118 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 RSL24D1P1-201ENST00000404972 493 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 JKAMPP1-201ENST00000413804 919 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SCN7AQ01118 USP12PY-201ENST00000427677 1064 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 AC236972.1-201ENST00000433225 199 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 UBE2DNL-203ENST00000474922 222 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 NPM1P17-201ENST00000479221 602 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.35□□□□□ -1.71
SCN7AQ01118 MIR3124-201ENST00000582636 67 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 AC006539.2-201ENST00000601729 572 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.35□□□□□ -1.71
SCN7AQ01118 AC022149.2-201ENST00000621061 203 ntBASIC4.35□□□□□ -1.71
SCN7AQ01118 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms