Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.62□□□□□ -1.67
RAE1P78406 C4BPAP1-201ENST00000415474 1893 ntBASIC4.62□□□□□ -1.67
RAE1P78406 AC006484.1-201ENST00000435086 1884 ntBASIC4.62□□□□□ -1.67
RAE1P78406 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
RAE1P78406 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.62□□□□□ -1.67
RAE1P78406 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.61□□□□□ -1.67
RAE1P78406 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 Y_RNA.25-201ENST00000362528 102 ntBASIC4.61□□□□□ -1.67
RAE1P78406 RN7SKP95-201ENST00000362860 303 ntBASIC4.61□□□□□ -1.67
RAE1P78406 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 UBBP2-201ENST00000376781 231 ntBASIC4.61□□□□□ -1.67
RAE1P78406 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RAE1P78406 ATP5F1P4-201ENST00000397288 746 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AL121978.1-201ENST00000402778 359 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AL592291.1-201ENST00000403830 352 ntBASIC4.61□□□□□ -1.67
RAE1P78406 ARL4AP5-201ENST00000404372 599 ntBASIC4.61□□□□□ -1.67
RAE1P78406 MIR1284-201ENST00000408337 120 ntBASIC4.61□□□□□ -1.67
RAE1P78406 RPS15AP38-201ENST00000413110 372 ntBASIC4.61□□□□□ -1.67
RAE1P78406 CEACAMP8-201ENST00000413902 580 ntBASIC4.61□□□□□ -1.67
RAE1P78406 RBMY2KP-201ENST00000418221 992 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AC062016.2-201ENST00000420950 676 ntBASIC4.61□□□□□ -1.67
RAE1P78406 BX510359.3-201ENST00000422168 306 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AL589823.1-201ENST00000429577 183 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 MTCYBP39-201ENST00000437562 491 ntBASIC4.61□□□□□ -1.67
RAE1P78406 ELOCP10-201ENST00000440624 327 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.61□□□□□ -1.67
RAE1P78406 AC108463.1-201ENST00000450258 347 ntBASIC4.61□□□□□ -1.67
RAE1P78406 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 AC140172.1-201ENST00000502928 141 ntBASIC4.61□□□□□ -1.67
RAE1P78406 DSTNP2-201ENST00000504533 515 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC093281.2-201ENST00000510153 597 ntBASIC4.61□□□□□ -1.67
RAE1P78406 RNU6-488P-201ENST00000515918 99 ntBASIC4.61□□□□□ -1.67
RAE1P78406 RNU6-202P-201ENST00000515998 96 ntBASIC4.61□□□□□ -1.67
RAE1P78406 NDUFA5P2-201ENST00000519723 344 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC106038.2-201ENST00000520706 568 ntBASIC4.61□□□□□ -1.67
RAE1P78406 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.61□□□□□ -1.67
RAE1P78406 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AC007115.1-201ENST00000546853 234 ntBASIC4.61□□□□□ -1.67
RAE1P78406 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.61□□□□□ -1.67
RAE1P78406 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.61□□□□□ -1.67
RAE1P78406 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.61□□□□□ -1.67
RAE1P78406 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.61□□□□□ -1.67
RAE1P78406 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.61□□□□□ -1.67
RAE1P78406 AC008687.2-201ENST00000597865 520 ntBASIC4.61□□□□□ -1.67
RAE1P78406 ELOCP34-201ENST00000604436 327 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AL031667.3-201ENST00000620124 655 ntBASIC4.61□□□□□ -1.67
RAE1P78406 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC012414.7-202ENST00000622705 1090 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC098679.5-201ENST00000624394 571 ntBASIC4.61□□□□□ -1.67
RAE1P78406 AC120349.2-201ENST00000625002 298 ntBASIC4.61□□□□□ -1.67
RAE1P78406 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RAE1P78406 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.61□□□□□ -1.67
RAE1P78406 ZNF833P-201ENST00000424938 1494 ntBASIC4.61□□□□□ -1.67
RAE1P78406 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 AC019072.1-201ENST00000604535 1551 ntBASIC4.61□□□□□ -1.67
RAE1P78406 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
RAE1P78406 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 MRRFP1-201ENST00000435941 1675 ntBASIC4.61□□□□□ -1.67
RAE1P78406 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.61□□□□□ -1.67
RAE1P78406 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
RAE1P78406 USP9YP4-201ENST00000424401 1745 ntBASIC4.6□□□□□ -1.67
RAE1P78406 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
RAE1P78406 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.6□□□□□ -1.67
RAE1P78406 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.6□□□□□ -1.67
RAE1P78406 RN7SKP269-201ENST00000365545 319 ntBASIC4.6□□□□□ -1.67
RAE1P78406 MIR506-201ENST00000384998 124 ntBASIC4.6□□□□□ -1.67
RAE1P78406 MT-TH-201ENST00000387441 69 ntBASIC4.6□□□□□ -1.67
RAE1P78406 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RAE1P78406 SNORA26.8-201ENST00000391306 124 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.6□□□□□ -1.67
RAE1P78406 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RAE1P78406 MTCO3P31-201ENST00000405526 789 ntBASIC4.6□□□□□ -1.67
RAE1P78406 NCSTNP1-201ENST00000406229 144 ntBASIC4.6□□□□□ -1.67
RAE1P78406 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
RAE1P78406 RPL23AP39-201ENST00000415533 405 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms