Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC009643.1-201ENST00000532030 391 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.42□□□□□ -1.86
ACTBP60709 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.42□□□□□ -1.86
ACTBP60709 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.42□□□□□ -1.86
ACTBP60709 AC022655.2-201ENST00000577280 318 ntBASIC3.42□□□□□ -1.86
ACTBP60709 MIR4277-201ENST00000578298 84 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC008745.1-201ENST00000604064 271 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC114878.2-201ENST00000604863 1251 ntBASIC3.42□□□□□ -1.86
ACTBP60709 AC121761.2-201ENST00000617300 689 ntBASIC3.42□□□□□ -1.86
ACTBP60709 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.42□□□□□ -1.86
ACTBP60709 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ACTBP60709 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.42□□□□□ -1.86
ACTBP60709 AL139254.3-201ENST00000641097 674 ntBASIC3.42□□□□□ -1.86
ACTBP60709 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ACTBP60709 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
ACTBP60709 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.42□□□□□ -1.86
ACTBP60709 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ACTBP60709 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 AL353743.4-201ENST00000422653 1547 ntBASIC3.41□□□□□ -1.86
ACTBP60709 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 CR381670.1-201ENST00000624291 1693 ntBASIC3.41□□□□□ -1.86
ACTBP60709 RNU4-39P-201ENST00000362455 127 ntBASIC3.41□□□□□ -1.86
ACTBP60709 SNORA56-201ENST00000383966 129 ntBASIC3.41□□□□□ -1.86
ACTBP60709 U3.22-201ENST00000391120 215 ntBASIC3.41□□□□□ -1.86
ACTBP60709 HMGB1P10-201ENST00000395823 563 ntBASIC3.41□□□□□ -1.86
ACTBP60709 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 AL035696.2-201ENST00000407941 709 ntBASIC3.41□□□□□ -1.86
ACTBP60709 NRBF2P2-201ENST00000413087 861 ntBASIC3.41□□□□□ -1.86
ACTBP60709 RPL7AP73-201ENST00000413490 353 ntBASIC3.41□□□□□ -1.86
ACTBP60709 MTND4P11-201ENST00000417020 1058 ntBASIC3.41□□□□□ -1.86
ACTBP60709 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.41□□□□□ -1.86
ACTBP60709 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.41□□□□□ -1.86
ACTBP60709 HMGB1P37-201ENST00000439613 609 ntBASIC3.41□□□□□ -1.86
ACTBP60709 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.41□□□□□ -1.86
ACTBP60709 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.41□□□□□ -1.86
ACTBP60709 NANOGP10-201ENST00000453325 895 ntBASIC3.41□□□□□ -1.86
ACTBP60709 AC098824.1-201ENST00000453565 980 ntBASIC3.41□□□□□ -1.86
ACTBP60709 RNA5SP246-201ENST00000458909 119 ntBASIC3.41□□□□□ -1.86
ACTBP60709 RN7SL303P-201ENST00000469773 251 ntBASIC3.41□□□□□ -1.86
ACTBP60709 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.41□□□□□ -1.86
ACTBP60709 AF213884.1-201ENST00000488102 463 ntBASIC3.41□□□□□ -1.86
ACTBP60709 PTGES3P3-201ENST00000511479 482 ntBASIC3.41□□□□□ -1.86
ACTBP60709 SNORD116-30-201ENST00000516468 85 ntBASIC3.41□□□□□ -1.86
ACTBP60709 MTND1P6-201ENST00000523621 946 ntBASIC3.41□□□□□ -1.86
ACTBP60709 OR7E10P-201ENST00000526420 991 ntBASIC3.41□□□□□ -1.86
ACTBP60709 TVP23BP1-201ENST00000557500 617 ntBASIC3.41□□□□□ -1.86
ACTBP60709 AC099489.2-201ENST00000574976 260 ntBASIC3.41□□□□□ -1.86
ACTBP60709 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.41□□□□□ -1.86
ACTBP60709 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.41□□□□□ -1.86
ACTBP60709 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.41□□□□□ -1.86
ACTBP60709 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.41□□□□□ -1.86
ACTBP60709 Z82195.1-201ENST00000604558 398 ntBASIC3.41□□□□□ -1.86
ACTBP60709 AC090425.2-201ENST00000608818 501 ntBASIC3.41□□□□□ -1.86
ACTBP60709 U7.8-201ENST00000619968 63 ntBASIC3.41□□□□□ -1.86
ACTBP60709 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.41□□□□□ -1.86
ACTBP60709 AC091905.1-201ENST00000624400 311 ntBASIC3.41□□□□□ -1.86
ACTBP60709 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.41□□□□□ -1.86
ACTBP60709 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.41□□□□□ -1.86
ACTBP60709 AC005183.1-201ENST00000603687 1979 ntBASIC3.41□□□□□ -1.86
ACTBP60709 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ACTBP60709 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
ACTBP60709 AC116667.1-201ENST00000604855 2072 ntBASIC3.4□□□□□ -1.86
ACTBP60709 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ACTBP60709 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
ACTBP60709 RNU6-618P-201ENST00000363518 112 ntBASIC3.4□□□□□ -1.87
ACTBP60709 HSPE1P8-201ENST00000406997 288 ntBASIC3.4□□□□□ -1.87
ACTBP60709 RPL31P2-201ENST00000413849 377 ntBASIC3.4□□□□□ -1.87
ACTBP60709 HMGB1P32-201ENST00000425971 565 ntBASIC3.4□□□□□ -1.87
ACTBP60709 OR5AW1P-201ENST00000426334 1006 ntBASIC3.4□□□□□ -1.87
ACTBP60709 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.4□□□□□ -1.87
ACTBP60709 AC023141.6-201ENST00000429418 337 ntBASIC3.4□□□□□ -1.87
ACTBP60709 UBE2V2P1-201ENST00000434717 398 ntBASIC3.4□□□□□ -1.87
ACTBP60709 AC006011.1-201ENST00000442758 349 ntBASIC3.4□□□□□ -1.87
ACTBP60709 RPL31P53-201ENST00000457065 348 ntBASIC3.4□□□□□ -1.87
ACTBP60709 NDUFA5P9-201ENST00000472609 340 ntBASIC3.4□□□□□ -1.87
ACTBP60709 AP000893.1-201ENST00000474462 794 ntBASIC3.4□□□□□ -1.87
ACTBP60709 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.4□□□□□ -1.87
ACTBP60709 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.4□□□□□ -1.87
ACTBP60709 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.4□□□□□ -1.87
ACTBP60709 CEACAMP10-202ENST00000495431 496 ntBASIC3.4□□□□□ -1.87
ACTBP60709 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.4□□□□□ -1.87
ACTBP60709 AC025674.1-201ENST00000507074 324 ntBASIC3.4□□□□□ -1.87
ACTBP60709 AC093824.1-201ENST00000508796 343 ntBASIC3.4□□□□□ -1.87
ACTBP60709 CCNHP1-201ENST00000513311 678 ntBASIC3.4□□□□□ -1.87
ACTBP60709 RNA5SP49-201ENST00000516450 115 ntBASIC3.4□□□□□ -1.87
ACTBP60709 RNA5SP519-201ENST00000516480 119 ntBASIC3.4□□□□□ -1.87
ACTBP60709 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.4□□□□□ -1.87
ACTBP60709 PDCL2P2-201ENST00000533651 189 ntBASIC3.4□□□□□ -1.87
ACTBP60709 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.4□□□□□ -1.87
ACTBP60709 TRAV8-5-201ENST00000537369 341 ntBASIC3.4□□□□□ -1.87
ACTBP60709 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.4□□□□□ -1.87
ACTBP60709 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.4□□□□□ -1.87
ACTBP60709 PSMB7P1-201ENST00000556349 514 ntBASIC3.4□□□□□ -1.87
ACTBP60709 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms