Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 PNPLA4P1-201ENST00000458328 305 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC010618.1-201ENST00000469924 477 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.51□□□□□ -1.69
CLDN2P57739 AC048346.1-201ENST00000510247 144 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC093755.1-201ENST00000512950 1023 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC138938.1-201ENST00000515431 782 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 SNORA3.4-201ENST00000515969 96 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 RNU5A-4P-201ENST00000516588 111 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.51□□□□□ -1.69
CLDN2P57739 AC136624.4-201ENST00000573044 370 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 MIR3939-201ENST00000582614 106 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN2P57739 AC020634.1-201ENST00000608701 549 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC004908.3-201ENST00000610248 625 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 TUSC7.1-201ENST00000610969 165 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC105227.2-201ENST00000615075 605 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 AC124312.6-202ENST00000623624 418 ntBASIC4.51□□□□□ -1.69
CLDN2P57739 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.51□□□□□ -1.69
CLDN2P57739 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN2P57739 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CLDN2P57739 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CLDN2P57739 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CLDN2P57739 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
CLDN2P57739 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CLDN2P57739 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 AL672167.1-203ENST00000641299 2975 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CLDN2P57739 Y_RNA.465-201ENST00000384293 102 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 USP9YP31-201ENST00000431405 881 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 AC004865.1-201ENST00000442276 1003 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN2P57739 RPL21P71-201ENST00000465598 459 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC091951.3-201ENST00000504093 246 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC015795.1-201ENST00000513669 327 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 RNA5SP464-201ENST00000516251 108 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 AF279873.1-201ENST00000523393 313 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 NBEAP1-201ENST00000554452 979 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 SETP1-201ENST00000556014 845 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC145350.1-201ENST00000567426 208 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC124856.1-201ENST00000600819 896 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AL390816.3-201ENST00000604527 1066 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 ARF4P1-201ENST00000605447 541 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC092954.1-201ENST00000609121 445 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AC097478.2-201ENST00000610572 514 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 AC107075.1-201ENST00000613695 314 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC120349.3-201ENST00000624377 529 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 MTND2P41-201ENST00000637599 773 ntBASIC4.5□□□□□ -1.69
CLDN2P57739 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.5□□□□□ -1.69
CLDN2P57739 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CLDN2P57739 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.5□□□□□ -1.69
CLDN2P57739 AC006484.1-201ENST00000435086 1884 ntBASIC4.49□□□□□ -1.69
CLDN2P57739 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.49□□□□□ -1.69
CLDN2P57739 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN2P57739 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.49□□□□□ -1.69
CLDN2P57739 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN2P57739 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN2P57739 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
CLDN2P57739 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CLDN2P57739 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CLDN2P57739 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.49□□□□□ -1.69
CLDN2P57739 MIR217-201ENST00000384817 110 ntBASIC4.49□□□□□ -1.69
CLDN2P57739 SNORD65.1-201ENST00000390889 71 ntBASIC4.49□□□□□ -1.69
CLDN2P57739 AL356967.1-201ENST00000406305 431 ntBASIC4.49□□□□□ -1.69
CLDN2P57739 AL450992.3-201ENST00000413192 568 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms