Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
CDH6P55285 MTCO1P52-201ENST00000433928 531 ntBASIC4.03□□□□□ -1.76
CDH6P55285 OR4C10P-201ENST00000434991 931 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH6P55285 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH6P55285 AC006326.1-201ENST00000445465 787 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH6P55285 AL162151.2-201ENST00000448875 158 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH6P55285 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH6P55285 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CDH6P55285 RPS3AP6-201ENST00000484430 795 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AC023050.1-201ENST00000498198 304 ntBASIC4.03□□□□□ -1.76
CDH6P55285 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
CDH6P55285 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH6P55285 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH6P55285 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH6P55285 TOMM20P2-201ENST00000540082 421 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH6P55285 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.03□□□□□ -1.76
CDH6P55285 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH6P55285 AC120057.2-201ENST00000571520 271 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.03□□□□□ -1.76
CDH6P55285 MIR548Y-201ENST00000582739 110 ntBASIC4.03□□□□□ -1.76
CDH6P55285 MIR4697-201ENST00000582977 78 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AL592436.1-201ENST00000605135 558 ntBASIC4.03□□□□□ -1.76
CDH6P55285 AC073111.2-201ENST00000605657 1075 ntBASIC4.03□□□□□ -1.76
CDH6P55285 MIR6500-201ENST00000622700 86 ntBASIC4.03□□□□□ -1.76
CDH6P55285 ATE1-AS1-202ENST00000636460 506 ntBASIC4.03□□□□□ -1.76
CDH6P55285 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH6P55285 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.03□□□□□ -1.76
CDH6P55285 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDH6P55285 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.03□□□□□ -1.76
CDH6P55285 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDH6P55285 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
CDH6P55285 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.77
CDH6P55285 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH6P55285 MTCO1P14-201ENST00000441695 1559 ntBASIC4.02□□□□□ -1.77
CDH6P55285 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 RNF6P1-201ENST00000444889 1784 ntBASIC4.02□□□□□ -1.77
CDH6P55285 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDH6P55285 RNU6-317P-201ENST00000384031 107 ntBASIC4.02□□□□□ -1.77
CDH6P55285 RNU4-31P-201ENST00000384211 141 ntBASIC4.02□□□□□ -1.77
CDH6P55285 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
CDH6P55285 YY1P1-201ENST00000427625 668 ntBASIC4.02□□□□□ -1.77
CDH6P55285 USP12PY-201ENST00000427677 1064 ntBASIC4.02□□□□□ -1.77
CDH6P55285 MTCO1P57-201ENST00000432182 261 ntBASIC4.02□□□□□ -1.77
CDH6P55285 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 EXTL2P1-201ENST00000446218 416 ntBASIC4.02□□□□□ -1.77
CDH6P55285 TPMTP4-201ENST00000450749 678 ntBASIC4.02□□□□□ -1.77
CDH6P55285 RPL23AP71-201ENST00000470966 469 ntBASIC4.02□□□□□ -1.77
CDH6P55285 TPT1P3-201ENST00000492841 512 ntBASIC4.02□□□□□ -1.77
CDH6P55285 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CDH6P55285 AC093770.1-201ENST00000511559 571 ntBASIC4.02□□□□□ -1.77
CDH6P55285 AC108064.1-201ENST00000513791 460 ntBASIC4.02□□□□□ -1.77
CDH6P55285 AC022790.1-201ENST00000522872 204 ntBASIC4.02□□□□□ -1.77
CDH6P55285 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH6P55285 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.02□□□□□ -1.77
CDH6P55285 AC090877.1-201ENST00000561418 344 ntBASIC4.02□□□□□ -1.77
CDH6P55285 MIR4644-201ENST00000579929 84 ntBASIC4.02□□□□□ -1.77
CDH6P55285 NF1P5-201ENST00000588287 448 ntBASIC4.02□□□□□ -1.77
CDH6P55285 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH6P55285 AP001542.1-201ENST00000591314 200 ntBASIC4.02□□□□□ -1.77
CDH6P55285 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 AC083899.3-201ENST00000603413 594 ntBASIC4.02□□□□□ -1.77
CDH6P55285 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.02□□□□□ -1.77
CDH6P55285 ZYXP1-201ENST00000617638 118 ntBASIC4.02□□□□□ -1.77
CDH6P55285 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.02□□□□□ -1.77
CDH6P55285 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
CDH6P55285 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDH6P55285 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH6P55285 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH6P55285 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 MIR372-201ENST00000362225 67 ntBASIC4.01□□□□□ -1.77
CDH6P55285 RNA5SP97-201ENST00000365006 84 ntBASIC4.01□□□□□ -1.77
CDH6P55285 U3.15-201ENST00000365398 212 ntBASIC4.01□□□□□ -1.77
CDH6P55285 HLFP1-201ENST00000402375 499 ntBASIC4.01□□□□□ -1.77
CDH6P55285 AL160175.1-201ENST00000428124 247 ntBASIC4.01□□□□□ -1.77
CDH6P55285 AC004975.1-201ENST00000428733 208 ntBASIC4.01□□□□□ -1.77
CDH6P55285 AL117339.2-201ENST00000430475 180 ntBASIC4.01□□□□□ -1.77
CDH6P55285 AC091390.1-201ENST00000433904 331 ntBASIC4.01□□□□□ -1.77
CDH6P55285 RPL21P89-201ENST00000444021 467 ntBASIC4.01□□□□□ -1.77
CDH6P55285 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.01□□□□□ -1.77
CDH6P55285 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH6P55285 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH6P55285 FTH1P21-201ENST00000512179 511 ntBASIC4.01□□□□□ -1.77
CDH6P55285 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.01□□□□□ -1.77
CDH6P55285 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDH6P55285 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.01□□□□□ -1.77
CDH6P55285 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH6P55285 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH6P55285 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.01□□□□□ -1.77
CDH6P55285 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms