Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGCS2P54868 RPL31P20-201ENST00000449593 360 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCS2P54868 RPL7P24-201ENST00000493052 752 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HMGCS2P54868 WBP1LP4-201ENST00000505043 344 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 AC025554.1-201ENST00000505641 188 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 AC026427.2-201ENST00000506228 536 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 PPBPP1-201ENST00000510807 373 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 RAC1P2-201ENST00000511164 579 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 RNU6-491P-201ENST00000516099 110 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCS2P54868 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.38□□□□□ -1.71
HMGCS2P54868 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCS2P54868 AC012213.4-201ENST00000606457 354 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 AL442067.2-201ENST00000614033 363 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 AC079684.1-201ENST00000621405 437 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 AL392088.2-201ENST00000637607 285 ntBASIC4.38□□□□□ -1.71
HMGCS2P54868 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.38□□□□□ -1.71
HMGCS2P54868 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.38□□□□□ -1.71
HMGCS2P54868 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGCS2P54868 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGCS2P54868 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HMGCS2P54868 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGCS2P54868 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC024341.1-201ENST00000526444 1552 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 AC007342.7-201ENST00000624610 2337 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGCS2P54868 DPY19L1P2-201ENST00000426647 915 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 SNORA71B-202ENST00000439232 272 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 RPL21P23-201ENST00000446654 460 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 AL354710.1-201ENST00000453641 246 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGCS2P54868 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGCS2P54868 BTG4P1-201ENST00000510421 183 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 AC021146.3-201ENST00000511911 260 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 RN7SKP13-201ENST00000515933 244 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC107918.3-201ENST00000533272 382 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGCS2P54868 SNORA62.6-201ENST00000606322 83 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 AC084036.1-201ENST00000609190 508 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 AC243312.2-201ENST00000623340 601 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 LINC00216-201ENST00000623548 1126 ntBASIC4.37□□□□□ -1.71
HMGCS2P54868 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGCS2P54868 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.37□□□□□ -1.71
HMGCS2P54868 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGCS2P54868 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGCS2P54868 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGCS2P54868 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGCS2P54868 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGCS2P54868 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS2P54868 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS2P54868 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS2P54868 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS2P54868 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HMGCS2P54868 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS2P54868 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGCS2P54868 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS2P54868 OR52E6-202ENST00000379946 954 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 MIR490-201ENST00000384865 128 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AL512430.2-201ENST00000406786 339 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS2P54868 MTCYBP7-201ENST00000419540 1134 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS2P54868 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS2P54868 MTND4P15-201ENST00000437913 1033 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 EIF4A1P11-201ENST00000451239 222 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AC007967.1-201ENST00000455422 1159 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGCS2P54868 RPS26P28-201ENST00000470806 348 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AL358832.1-201ENST00000497800 389 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS2P54868 OR8K2P-201ENST00000524645 927 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS2P54868 AC087888.1-201ENST00000550884 1254 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AC074029.2-201ENST00000551045 634 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS2P54868 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGCS2P54868 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.36□□□□□ -1.71
HMGCS2P54868 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGCS2P54868 AC074029.4-201ENST00000624796 1859 ntBASIC4.36□□□□□ -1.71
HMGCS2P54868 AC083899.2-201ENST00000423285 1376 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms