Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AP001207.1-201ENST00000524051 481 ntBASIC5.06□□□□□ -1.6
COPAP53621 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.06□□□□□ -1.6
COPAP53621 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.06□□□□□ -1.6
COPAP53621 MIR3667-201ENST00000581025 74 ntBASIC5.06□□□□□ -1.6
COPAP53621 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.06□□□□□ -1.6
COPAP53621 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.06□□□□□ -1.6
COPAP53621 AC064807.4-201ENST00000607201 407 ntBASIC5.06□□□□□ -1.6
COPAP53621 AL451074.6-201ENST00000608512 729 ntBASIC5.06□□□□□ -1.6
COPAP53621 AP001521.2-201ENST00000608772 546 ntBASIC5.06□□□□□ -1.6
COPAP53621 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPAP53621 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.06□□□□□ -1.6
COPAP53621 AC108359.1-201ENST00000616451 1211 ntBASIC5.06□□□□□ -1.6
COPAP53621 AC121761.2-201ENST00000617300 689 ntBASIC5.06□□□□□ -1.6
COPAP53621 AC124312.6-202ENST00000623624 418 ntBASIC5.06□□□□□ -1.6
COPAP53621 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
COPAP53621 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.06□□□□□ -1.6
COPAP53621 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COPAP53621 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.06□□□□□ -1.6
COPAP53621 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPAP53621 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPAP53621 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
COPAP53621 AC007390.2-201ENST00000606229 3803 ntBASIC5.06□□□□□ -1.6
COPAP53621 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
COPAP53621 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
COPAP53621 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COPAP53621 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.05□□□□□ -1.6
COPAP53621 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.05□□□□□ -1.6
COPAP53621 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.05□□□□□ -1.6
COPAP53621 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 RNA5SP191-201ENST00000362585 102 ntBASIC5.05□□□□□ -1.6
COPAP53621 RNU6-1151P-201ENST00000384684 107 ntBASIC5.05□□□□□ -1.6
COPAP53621 AL161909.1-201ENST00000397390 712 ntBASIC5.05□□□□□ -1.6
COPAP53621 AL390316.1-201ENST00000406279 553 ntBASIC5.05□□□□□ -1.6
COPAP53621 U3.32-201ENST00000408116 212 ntBASIC5.05□□□□□ -1.6
COPAP53621 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC090960.1-201ENST00000421072 306 ntBASIC5.05□□□□□ -1.6
COPAP53621 OFD1P2Y-201ENST00000421895 1149 ntBASIC5.05□□□□□ -1.6
COPAP53621 AL139421.1-201ENST00000423010 169 ntBASIC5.05□□□□□ -1.6
COPAP53621 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 Z93242.1-201ENST00000427102 353 ntBASIC5.05□□□□□ -1.6
COPAP53621 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.05□□□□□ -1.6
COPAP53621 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 AL138878.2-201ENST00000440581 1241 ntBASIC5.05□□□□□ -1.6
COPAP53621 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.05□□□□□ -1.6
COPAP53621 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 AL513533.1-201ENST00000453728 415 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.05□□□□□ -1.6
COPAP53621 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.05□□□□□ -1.6
COPAP53621 RN7SL346P-201ENST00000491561 294 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
COPAP53621 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.05□□□□□ -1.6
COPAP53621 AC073358.1-201ENST00000505671 684 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.05□□□□□ -1.6
COPAP53621 RNU6-885P-201ENST00000516607 104 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 AC135279.1-201ENST00000543493 504 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.05□□□□□ -1.6
COPAP53621 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.05□□□□□ -1.6
COPAP53621 GSTP1P1-201ENST00000548078 319 ntBASIC5.05□□□□□ -1.6
COPAP53621 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 AC109446.2-201ENST00000567872 497 ntBASIC5.05□□□□□ -1.6
COPAP53621 RN7SL52P-201ENST00000584271 284 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 ELOCP28-201ENST00000590044 317 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC018638.7-201ENST00000605836 1114 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC080013.6-201ENST00000606185 215 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC023158.2-201ENST00000614876 543 ntBASIC5.05□□□□□ -1.6
COPAP53621 AC090246.1-201ENST00000616499 426 ntBASIC5.05□□□□□ -1.6
COPAP53621 LINC00901.1-201ENST00000617252 152 ntBASIC5.05□□□□□ -1.6
COPAP53621 RN7SL722P-201ENST00000617780 284 ntBASIC5.05□□□□□ -1.6
COPAP53621 RN7SL565P-201ENST00000618246 284 ntBASIC5.05□□□□□ -1.6
COPAP53621 AL512506.2-201ENST00000624472 458 ntBASIC5.05□□□□□ -1.6
COPAP53621 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.05□□□□□ -1.6
COPAP53621 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
COPAP53621 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COPAP53621 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPAP53621 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 688.8 ms