Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.31□□□□□ -1.88
POLR2JP52435 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR2JP52435 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR2JP52435 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR2JP52435 U4.6-201ENST00000621618 127 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 AC119674.1-207ENST00000641355 633 ntBASIC3.31□□□□□ -1.88
POLR2JP52435 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.31□□□□□ -1.88
POLR2JP52435 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
POLR2JP52435 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.31□□□□□ -1.88
POLR2JP52435 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
POLR2JP52435 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
POLR2JP52435 AC032011.1-201ENST00000611703 1549 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
POLR2JP52435 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR2JP52435 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
POLR2JP52435 Z73965.1-201ENST00000623412 2297 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR2JP52435 SNORD9-201ENST00000362566 104 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 RN7SKP44-201ENST00000363602 316 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR2JP52435 AL356968.1-201ENST00000416622 474 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 DBIP2-201ENST00000419076 262 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 AL034379.1-201ENST00000423216 253 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
POLR2JP52435 RPS27AP12-201ENST00000429552 465 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 AC013410.1-201ENST00000436223 1232 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR2JP52435 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR2JP52435 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR2JP52435 RPL7P48-201ENST00000461513 746 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 NDUFA5P9-201ENST00000472609 340 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 RN7SL132P-201ENST00000478131 296 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.3□□□□□ -1.88
POLR2JP52435 AGGF1P8-201ENST00000562979 1000 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 RN7SL703P-201ENST00000578485 302 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 AL590392.1-201ENST00000604960 446 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 AL049634.3-201ENST00000604968 457 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 AC090912.3-201ENST00000609775 533 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 ZYXP1-201ENST00000617638 118 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
POLR2JP52435 AC090971.4-201ENST00000560291 1800 ntBASIC3.3□□□□□ -1.88
POLR2JP52435 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.3□□□□□ -1.88
POLR2JP52435 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.3□□□□□ -1.88
POLR2JP52435 AC090337.1-201ENST00000579651 2074 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
POLR2JP52435 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
POLR2JP52435 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR2JP52435 RNA5SP51-201ENST00000364750 119 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
POLR2JP52435 RNU6-1279P-201ENST00000383917 103 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 SNORA56-201ENST00000383966 129 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 AC126124.2-201ENST00000413542 321 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 AL807761.1-201ENST00000417622 171 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 RPA2P2-201ENST00000419698 796 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
POLR2JP52435 FAR2P4-202ENST00000425399 584 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR2JP52435 NPM1P48-201ENST00000436002 853 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 AC008264.1-201ENST00000447612 367 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR2JP52435 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR2JP52435 UBE2CP3-201ENST00000502715 450 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 AC020593.1-201ENST00000507399 299 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR2JP52435 SNORA70.18-201ENST00000516696 98 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR2JP52435 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.29□□□□□ -1.88
POLR2JP52435 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.29□□□□□ -1.88
POLR2JP52435 MIR5685-201ENST00000579080 79 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.29□□□□□ -1.88
POLR2JP52435 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.29□□□□□ -1.88
POLR2JP52435 AC017071.1-201ENST00000564407 2204 ntBASIC3.29□□□□□ -1.88
POLR2JP52435 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
POLR2JP52435 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
POLR2JP52435 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
POLR2JP52435 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
POLR2JP52435 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2JP52435 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2JP52435 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2JP52435 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
POLR2JP52435 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2JP52435 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
POLR2JP52435 RSL24D1P1-201ENST00000404972 493 ntBASIC3.28□□□□□ -1.88
POLR2JP52435 TCEA1P4-201ENST00000415066 844 ntBASIC3.28□□□□□ -1.88
POLR2JP52435 AC245291.1-201ENST00000419501 328 ntBASIC3.28□□□□□ -1.88
POLR2JP52435 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
POLR2JP52435 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR2JP52435 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.28□□□□□ -1.88
POLR2JP52435 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR2JP52435 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
POLR2JP52435 SNORA64.4-201ENST00000516632 81 ntBASIC3.28□□□□□ -1.88
POLR2JP52435 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR2JP52435 OR8R1P-201ENST00000543943 764 ntBASIC3.28□□□□□ -1.88
POLR2JP52435 AC008126.1-201ENST00000549019 480 ntBASIC3.28□□□□□ -1.88
POLR2JP52435 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.28□□□□□ -1.88
POLR2JP52435 MIR4443-201ENST00000585052 53 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms