Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCNKAP51800 MTCO3P15-201ENST00000526563 574 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCNKAP51800 HIGD1AP5-201ENST00000529959 259 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.47□□□□□ -1.69
CLCNKAP51800 GSTP1P1-201ENST00000548078 319 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 MTND4P33-201ENST00000556706 766 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.47□□□□□ -1.69
CLCNKAP51800 AC009097.3-201ENST00000563557 1018 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC015912.2-201ENST00000571053 181 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC015688.2-201ENST00000584523 262 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCNKAP51800 AC025811.1-201ENST00000604312 472 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL356218.2-201ENST00000605264 187 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL583856.2-201ENST00000606298 543 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC097505.1-201ENST00000610199 565 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AL138478.1-201ENST00000612252 832 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 AC021755.4-201ENST00000616620 456 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 LINC00901.1-201ENST00000617252 152 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.47□□□□□ -1.69
CLCNKAP51800 AC090897.3-201ENST00000636973 1157 ntBASIC4.47□□□□□ -1.69
CLCNKAP51800 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLCNKAP51800 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
CLCNKAP51800 RAD17P1-201ENST00000418130 2042 ntBASIC4.46□□□□□ -1.69
CLCNKAP51800 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC138393.1-206ENST00000540997 1886 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 NSRP1P1-201ENST00000444067 1693 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 MTND4P8-201ENST00000514997 1362 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 RNU6-1339P-201ENST00000363574 91 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 RNU4-28P-201ENST00000364739 141 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCNKAP51800 MIR659-201ENST00000384963 97 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 MIR141-201ENST00000384975 95 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 ATP5F1P2-201ENST00000398143 760 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AL356387.2-201ENST00000422272 243 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCNKAP51800 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCNKAP51800 RPL21P43-201ENST00000425440 472 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCNKAP51800 RPS24P8-201ENST00000431490 402 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCNKAP51800 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.46□□□□□ -1.7
CLCNKAP51800 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC009263.1-201ENST00000441193 1239 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 Z77249.1-201ENST00000444622 1175 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 RPL7P31-201ENST00000450192 724 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCNKAP51800 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC015795.1-201ENST00000513669 327 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AC022790.1-201ENST00000522872 204 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCNKAP51800 DYNLL1P4-201ENST00000549314 266 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AL020997.3-201ENST00000602843 359 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC092106.3-201ENST00000611308 722 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AC012409.3-201ENST00000611343 981 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AC243654.2-201ENST00000612843 443 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 MIR7973-1-201ENST00000614683 76 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 U6.48-201ENST00000618523 106 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AL158163.2-201ENST00000619110 700 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 AP000484.1-201ENST00000620067 1252 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC015726.3-201ENST00000624501 418 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.46□□□□□ -1.7
CLCNKAP51800 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
CLCNKAP51800 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 CPHL1P-201ENST00000461341 3407 ntBASIC4.46□□□□□ -1.7
CLCNKAP51800 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.46□□□□□ -1.7
CLCNKAP51800 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLCNKAP51800 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.45□□□□□ -1.7
CLCNKAP51800 SCN1A-220ENST00000641603 12506 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 LINC00622-201ENST00000562811 1570 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCNKAP51800 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCNKAP51800 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCNKAP51800 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
CLCNKAP51800 AC005261.4-201ENST00000600047 1385 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
CLCNKAP51800 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLCNKAP51800 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CLCNKAP51800 IL6STP1-201ENST00000346911 1020 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 MIR525-201ENST00000384978 85 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 MIR921-201ENST00000401133 56 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 MTND4P13-201ENST00000402078 1023 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 AL356320.2-201ENST00000417263 507 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 RAD23BP1-201ENST00000421404 1227 ntBASIC4.45□□□□□ -1.7
CLCNKAP51800 RPL18P10-201ENST00000425606 538 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms