Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.3□□□□□ -1.4
USP11P51784 AC008127.2-201ENST00000549925 1075 ntBASIC6.3□□□□□ -1.4
USP11P51784 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.3□□□□□ -1.4
USP11P51784 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.3□□□□□ -1.4
USP11P51784 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.3□□□□□ -1.4
USP11P51784 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.3□□□□□ -1.4
USP11P51784 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC6.3□□□□□ -1.4
USP11P51784 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.3□□□□□ -1.4
USP11P51784 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
USP11P51784 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.3□□□□□ -1.4
USP11P51784 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
USP11P51784 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.3□□□□□ -1.4
USP11P51784 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
USP11P51784 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
USP11P51784 AP000473.2-201ENST00000602659 1537 ntBASIC6.3□□□□□ -1.4
USP11P51784 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.29□□□□□ -1.4
USP11P51784 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 GDI2P1-201ENST00000429312 1336 ntBASIC6.29□□□□□ -1.4
USP11P51784 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.29□□□□□ -1.4
USP11P51784 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
USP11P51784 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.29□□□□□ -1.4
USP11P51784 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 SNORD56.2-201ENST00000363242 71 ntBASIC6.29□□□□□ -1.4
USP11P51784 RNA5SP132-201ENST00000364725 118 ntBASIC6.29□□□□□ -1.4
USP11P51784 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
USP11P51784 RPS3AP3-201ENST00000411933 242 ntBASIC6.29□□□□□ -1.4
USP11P51784 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 BX295541.1-201ENST00000417774 250 ntBASIC6.29□□□□□ -1.4
USP11P51784 HMGB3P20-201ENST00000417997 600 ntBASIC6.29□□□□□ -1.4
USP11P51784 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 SKP1P3-201ENST00000429280 487 ntBASIC6.29□□□□□ -1.4
USP11P51784 FTH1P16-201ENST00000435241 552 ntBASIC6.29□□□□□ -1.4
USP11P51784 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 LINC02210-201ENST00000444561 288 ntBASIC6.29□□□□□ -1.4
USP11P51784 YWHAQP9-201ENST00000445891 512 ntBASIC6.29□□□□□ -1.4
USP11P51784 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 GAPDHP17-201ENST00000449858 1001 ntBASIC6.29□□□□□ -1.4
USP11P51784 AL606490.1-201ENST00000452266 765 ntBASIC6.29□□□□□ -1.4
USP11P51784 RN7SL188P-201ENST00000469842 285 ntBASIC6.29□□□□□ -1.4
USP11P51784 AC096576.1-201ENST00000489014 359 ntBASIC6.29□□□□□ -1.4
USP11P51784 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.29□□□□□ -1.4
USP11P51784 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.29□□□□□ -1.4
USP11P51784 OR5AN2P-201ENST00000534535 896 ntBASIC6.29□□□□□ -1.4
USP11P51784 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 AL512360.1-201ENST00000555346 234 ntBASIC6.29□□□□□ -1.4
USP11P51784 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
USP11P51784 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 AC087283.1-201ENST00000604029 1074 ntBASIC6.29□□□□□ -1.4
USP11P51784 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 AC007363.1-201ENST00000604736 620 ntBASIC6.29□□□□□ -1.4
USP11P51784 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 AL118522.2-201ENST00000616045 615 ntBASIC6.29□□□□□ -1.4
USP11P51784 AC108479.2-201ENST00000617314 601 ntBASIC6.29□□□□□ -1.4
USP11P51784 AC092650.2-201ENST00000619984 902 ntBASIC6.29□□□□□ -1.4
USP11P51784 AL160413.1-201ENST00000622780 310 ntBASIC6.29□□□□□ -1.4
USP11P51784 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.29□□□□□ -1.4
USP11P51784 AC093591.3-201ENST00000634516 308 ntBASIC6.29□□□□□ -1.4
USP11P51784 AC079776.5-201ENST00000641920 211 ntBASIC6.29□□□□□ -1.4
USP11P51784 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.29□□□□□ -1.4
USP11P51784 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
USP11P51784 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.28□□□□□ -1.4
USP11P51784 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.28□□□□□ -1.4
USP11P51784 RNA5SP453-201ENST00000362503 119 ntBASIC6.28□□□□□ -1.4
USP11P51784 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
USP11P51784 Y_RNA.419-201ENST00000384041 102 ntBASIC6.28□□□□□ -1.4
USP11P51784 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
USP11P51784 AC025750.1-201ENST00000399891 379 ntBASIC6.28□□□□□ -1.4
USP11P51784 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.28□□□□□ -1.4
USP11P51784 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.28□□□□□ -1.4
USP11P51784 RN7SKP229-201ENST00000410465 302 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.28□□□□□ -1.4
USP11P51784 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.28□□□□□ -1.4
USP11P51784 Z93019.1-201ENST00000416450 973 ntBASIC6.28□□□□□ -1.4
USP11P51784 ZNF90P2-204ENST00000419323 1075 ntBASIC6.28□□□□□ -1.4
USP11P51784 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.28□□□□□ -1.4
USP11P51784 OR4F13P-201ENST00000428478 931 ntBASIC6.28□□□□□ -1.4
USP11P51784 AC005033.1-201ENST00000428904 813 ntBASIC6.28□□□□□ -1.4
USP11P51784 USP9YP15-201ENST00000442391 422 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms