Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
MRE11P49959 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.8□□□□□ -1.48
MRE11P49959 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.8□□□□□ -1.48
MRE11P49959 NCLP2-201ENST00000416078 1462 ntBASIC5.8□□□□□ -1.48
MRE11P49959 RNU1-146P-201ENST00000364015 165 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.8□□□□□ -1.48
MRE11P49959 SNORA66-201ENST00000384792 133 ntBASIC5.8□□□□□ -1.48
MRE11P49959 RNA5SP372-201ENST00000390836 115 ntBASIC5.8□□□□□ -1.48
MRE11P49959 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.8□□□□□ -1.48
MRE11P49959 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.8□□□□□ -1.48
MRE11P49959 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.8□□□□□ -1.48
MRE11P49959 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.8□□□□□ -1.48
MRE11P49959 MTCYBP5-201ENST00000423752 1135 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.8□□□□□ -1.48
MRE11P49959 FO393419.3-201ENST00000428741 282 ntBASIC5.8□□□□□ -1.48
MRE11P49959 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.8□□□□□ -1.48
MRE11P49959 AP000936.2-201ENST00000447151 681 ntBASIC5.8□□□□□ -1.48
MRE11P49959 RPL31P44-201ENST00000447680 377 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AL035407.2-201ENST00000454090 378 ntBASIC5.8□□□□□ -1.48
MRE11P49959 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.8□□□□□ -1.48
MRE11P49959 AL389915.2-201ENST00000454576 441 ntBASIC5.8□□□□□ -1.48
MRE11P49959 SRRM1P2-201ENST00000464531 1192 ntBASIC5.8□□□□□ -1.48
MRE11P49959 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.8□□□□□ -1.48
MRE11P49959 RPL7AP10-201ENST00000481016 791 ntBASIC5.8□□□□□ -1.48
MRE11P49959 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.8□□□□□ -1.48
MRE11P49959 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.8□□□□□ -1.48
MRE11P49959 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.8□□□□□ -1.48
MRE11P49959 AC097173.1-201ENST00000505862 819 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AC008885.2-201ENST00000509506 930 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AC108120.2-201ENST00000512973 294 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AC026402.1-201ENST00000513642 170 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.8□□□□□ -1.48
MRE11P49959 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.8□□□□□ -1.48
MRE11P49959 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.8□□□□□ -1.48
MRE11P49959 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.8□□□□□ -1.48
MRE11P49959 MIR5708-201ENST00000579723 85 ntBASIC5.8□□□□□ -1.48
MRE11P49959 VN1R74P-201ENST00000613259 503 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AP004607.9-201ENST00000618202 316 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AC073968.1-201ENST00000618594 637 ntBASIC5.8□□□□□ -1.48
MRE11P49959 AC099842.1-201ENST00000619919 596 ntBASIC5.8□□□□□ -1.48
MRE11P49959 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.8□□□□□ -1.48
MRE11P49959 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.8□□□□□ -1.48
MRE11P49959 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MRE11P49959 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MRE11P49959 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
MRE11P49959 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MRE11P49959 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
MRE11P49959 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
MRE11P49959 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MRE11P49959 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
MRE11P49959 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
MRE11P49959 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MRE11P49959 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.79□□□□□ -1.48
MRE11P49959 SAMMSON-213ENST00000641336 1521 ntBASIC5.79□□□□□ -1.48
MRE11P49959 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MRE11P49959 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MRE11P49959 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MRE11P49959 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 Y_RNA.560-201ENST00000384689 102 ntBASIC5.79□□□□□ -1.48
MRE11P49959 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AL031577.2-201ENST00000404133 280 ntBASIC5.79□□□□□ -1.48
MRE11P49959 ELOCP17-201ENST00000414751 326 ntBASIC5.79□□□□□ -1.48
MRE11P49959 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 NPM1P11-201ENST00000417106 855 ntBASIC5.79□□□□□ -1.48
MRE11P49959 MTND4LP11-201ENST00000422184 280 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC004448.2-201ENST00000422360 586 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC5.79□□□□□ -1.48
MRE11P49959 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.79□□□□□ -1.48
MRE11P49959 AL133173.1-201ENST00000423458 397 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC006946.1-201ENST00000429106 328 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC068287.1-201ENST00000430283 295 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.79□□□□□ -1.48
MRE11P49959 AC122718.1-201ENST00000439448 744 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC092170.1-201ENST00000440211 356 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC004980.3-201ENST00000447046 365 ntBASIC5.79□□□□□ -1.48
MRE11P49959 FAM133DP-201ENST00000464802 691 ntBASIC5.79□□□□□ -1.48
MRE11P49959 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MRE11P49959 AC068724.1-201ENST00000487100 792 ntBASIC5.79□□□□□ -1.48
MRE11P49959 RN7SL441P-201ENST00000492388 296 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC104971.1-201ENST00000495117 578 ntBASIC5.79□□□□□ -1.48
MRE11P49959 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC104090.1-201ENST00000506341 1171 ntBASIC5.79□□□□□ -1.48
MRE11P49959 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 AC010460.1-201ENST00000507087 466 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.79□□□□□ -1.48
MRE11P49959 RNU6-720P-201ENST00000516363 108 ntBASIC5.79□□□□□ -1.48
MRE11P49959 SCARNA16.4-201ENST00000516956 187 ntBASIC5.79□□□□□ -1.48
MRE11P49959 NDUFA5P2-201ENST00000519723 344 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.79□□□□□ -1.48
MRE11P49959 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 AP000619.3-201ENST00000535634 1127 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.79□□□□□ -1.48
MRE11P49959 BLZF2P-201ENST00000553776 1130 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.79□□□□□ -1.48
MRE11P49959 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 AC005341.1-201ENST00000571086 708 ntBASIC5.79□□□□□ -1.48
MRE11P49959 ISCA1P3-201ENST00000577104 373 ntBASIC5.79□□□□□ -1.48
MRE11P49959 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.79□□□□□ -1.48
MRE11P49959 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms