Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDX1P47902 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDX1P47902 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDX1P47902 RN7SKP103-201ENST00000363848 320 ntBASIC3.89□□□□□ -1.79
CDX1P47902 SNORD74.4-201ENST00000364129 80 ntBASIC3.89□□□□□ -1.79
CDX1P47902 RNU4-51P-201ENST00000364206 140 ntBASIC3.89□□□□□ -1.79
CDX1P47902 RNU6-707P-201ENST00000364647 95 ntBASIC3.89□□□□□ -1.79
CDX1P47902 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC3.89□□□□□ -1.79
CDX1P47902 MIR217-201ENST00000384817 110 ntBASIC3.89□□□□□ -1.79
CDX1P47902 HSPD1P16-201ENST00000402302 394 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AL035079.1-201ENST00000405210 287 ntBASIC3.89□□□□□ -1.79
CDX1P47902 SNORA77-201ENST00000408716 125 ntBASIC3.89□□□□□ -1.79
CDX1P47902 COX6B1P1-201ENST00000415962 213 ntBASIC3.89□□□□□ -1.79
CDX1P47902 RPS3AP9-201ENST00000417027 792 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.89□□□□□ -1.79
CDX1P47902 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.89□□□□□ -1.79
CDX1P47902 COX6CP15-201ENST00000426313 211 ntBASIC3.89□□□□□ -1.79
CDX1P47902 Z93242.1-201ENST00000427102 353 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC007559.1-201ENST00000428736 355 ntBASIC3.89□□□□□ -1.79
CDX1P47902 NANOGP6-201ENST00000429190 847 ntBASIC3.89□□□□□ -1.79
CDX1P47902 SEPT7P5-201ENST00000434048 306 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.89□□□□□ -1.79
CDX1P47902 AC004854.1-201ENST00000440356 349 ntBASIC3.89□□□□□ -1.79
CDX1P47902 RPS29P9-201ENST00000440360 171 ntBASIC3.89□□□□□ -1.79
CDX1P47902 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.89□□□□□ -1.79
CDX1P47902 COX6CP18-201ENST00000448769 222 ntBASIC3.89□□□□□ -1.79
CDX1P47902 RPS3AP41-201ENST00000462701 778 ntBASIC3.89□□□□□ -1.79
CDX1P47902 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.89□□□□□ -1.79
CDX1P47902 GTF2IP9-201ENST00000502460 301 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC083829.1-201ENST00000503756 657 ntBASIC3.89□□□□□ -1.79
CDX1P47902 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.89□□□□□ -1.79
CDX1P47902 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.89□□□□□ -1.79
CDX1P47902 AC113420.1-201ENST00000507903 571 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.89□□□□□ -1.79
CDX1P47902 AC016065.2-201ENST00000514530 444 ntBASIC3.89□□□□□ -1.79
CDX1P47902 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.89□□□□□ -1.79
CDX1P47902 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.89□□□□□ -1.79
CDX1P47902 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.89□□□□□ -1.79
CDX1P47902 AC079075.1-201ENST00000559543 878 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.89□□□□□ -1.79
CDX1P47902 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.89□□□□□ -1.79
CDX1P47902 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.89□□□□□ -1.79
CDX1P47902 MTCO2P2-201ENST00000591258 225 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC245884.10-201ENST00000597355 337 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC025946.2-201ENST00000603398 234 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.89□□□□□ -1.79
CDX1P47902 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC3.89□□□□□ -1.79
CDX1P47902 MIR4727-201ENST00000622232 55 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AP001784.1-201ENST00000624107 428 ntBASIC3.89□□□□□ -1.79
CDX1P47902 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.89□□□□□ -1.79
CDX1P47902 Z99496.1-201ENST00000469424 1477 ntBASIC3.89□□□□□ -1.79
CDX1P47902 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 USP8-204ENST00000425032 3559 ntTSL 2 BASIC3.89□□□□□ -1.79
CDX1P47902 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.89□□□□□ -1.79
CDX1P47902 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.89□□□□□ -1.79
CDX1P47902 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.89□□□□□ -1.79
CDX1P47902 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDX1P47902 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDX1P47902 NMD3P1-201ENST00000439704 1488 ntBASIC3.88□□□□□ -1.79
CDX1P47902 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 RNU6-492P-201ENST00000363035 104 ntBASIC3.88□□□□□ -1.79
CDX1P47902 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 MIR649-201ENST00000384843 97 ntBASIC3.88□□□□□ -1.79
CDX1P47902 RNU6-1300P-201ENST00000391046 108 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AL603766.1-201ENST00000407763 664 ntBASIC3.88□□□□□ -1.79
CDX1P47902 RNU6-584P-201ENST00000410350 95 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 MTCO2P8-201ENST00000412213 658 ntBASIC3.88□□□□□ -1.79
CDX1P47902 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 FCF1P2-201ENST00000415284 583 ntBASIC3.88□□□□□ -1.79
CDX1P47902 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.88□□□□□ -1.79
CDX1P47902 Z75741.2-201ENST00000417272 1167 ntBASIC3.88□□□□□ -1.79
CDX1P47902 OR2AM1P-201ENST00000422137 422 ntBASIC3.88□□□□□ -1.79
CDX1P47902 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDX1P47902 RWDD4P2-201ENST00000426392 563 ntBASIC3.88□□□□□ -1.79
CDX1P47902 MTCO1P54-201ENST00000430139 712 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 BX323845.1-201ENST00000432417 179 ntBASIC3.88□□□□□ -1.79
CDX1P47902 RHOT1P3-201ENST00000436571 331 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC093155.1-201ENST00000440164 826 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AC112498.1-201ENST00000444401 332 ntBASIC3.88□□□□□ -1.79
CDX1P47902 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 H2AFZP5-201ENST00000446960 382 ntBASIC3.88□□□□□ -1.79
CDX1P47902 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
CDX1P47902 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.88□□□□□ -1.79
CDX1P47902 AC112492.1-201ENST00000449607 712 ntBASIC3.88□□□□□ -1.79
CDX1P47902 TCEA1P1-201ENST00000449716 880 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms