Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 HMGB1P50-201ENST00000605814 607 ntBASIC3.91□□□□□ -1.78
RORAP35398 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.91□□□□□ -1.78
RORAP35398 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.91□□□□□ -1.78
RORAP35398 LINC00216-201ENST00000623548 1126 ntBASIC3.91□□□□□ -1.78
RORAP35398 CDRT1-208ENST00000630868 794 ntBASIC3.91□□□□□ -1.78
RORAP35398 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.91□□□□□ -1.78
RORAP35398 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RORAP35398 CASC19-261ENST00000641853 1638 ntBASIC3.91□□□□□ -1.78
RORAP35398 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RORAP35398 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.9□□□□□ -1.78
RORAP35398 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 RNU1-87P-201ENST00000363727 170 ntBASIC3.9□□□□□ -1.79
RORAP35398 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RORAP35398 RNU6-244P-201ENST00000391028 104 ntBASIC3.9□□□□□ -1.79
RORAP35398 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 OR8F1P-201ENST00000425243 930 ntBASIC3.9□□□□□ -1.79
RORAP35398 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RORAP35398 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.9□□□□□ -1.79
RORAP35398 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 PPIAP17-201ENST00000438507 471 ntBASIC3.9□□□□□ -1.79
RORAP35398 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 AC006011.1-201ENST00000442758 349 ntBASIC3.9□□□□□ -1.79
RORAP35398 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.9□□□□□ -1.79
RORAP35398 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 FABP3P2-201ENST00000453169 399 ntBASIC3.9□□□□□ -1.79
RORAP35398 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 SNORD108-201ENST00000459332 71 ntBASIC3.9□□□□□ -1.79
RORAP35398 RPL38P1-201ENST00000460914 211 ntBASIC3.9□□□□□ -1.79
RORAP35398 RPL7P1-201ENST00000468161 747 ntBASIC3.9□□□□□ -1.79
RORAP35398 RPL7P9-201ENST00000468715 747 ntBASIC3.9□□□□□ -1.79
RORAP35398 RPL23AP71-201ENST00000470966 469 ntBASIC3.9□□□□□ -1.79
RORAP35398 HMGB3P14-201ENST00000494195 599 ntBASIC3.9□□□□□ -1.79
RORAP35398 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.9□□□□□ -1.79
RORAP35398 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.9□□□□□ -1.79
RORAP35398 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 OR4U1P-201ENST00000554958 912 ntBASIC3.9□□□□□ -1.79
RORAP35398 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.9□□□□□ -1.79
RORAP35398 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.9□□□□□ -1.79
RORAP35398 AC067805.1-201ENST00000559344 470 ntBASIC3.9□□□□□ -1.79
RORAP35398 AC106785.3-201ENST00000564064 847 ntBASIC3.9□□□□□ -1.79
RORAP35398 CYP4A43P-201ENST00000568156 121 ntBASIC3.9□□□□□ -1.79
RORAP35398 AC034105.4-201ENST00000568304 277 ntBASIC3.9□□□□□ -1.79
RORAP35398 MIR4644-201ENST00000579929 84 ntBASIC3.9□□□□□ -1.79
RORAP35398 AC006130.2-201ENST00000586202 326 ntBASIC3.9□□□□□ -1.79
RORAP35398 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.9□□□□□ -1.79
RORAP35398 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.9□□□□□ -1.79
RORAP35398 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.9□□□□□ -1.79
RORAP35398 AC015726.3-201ENST00000624501 418 ntBASIC3.9□□□□□ -1.79
RORAP35398 CR392039.4-201ENST00000624968 501 ntBASIC3.9□□□□□ -1.79
RORAP35398 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.9□□□□□ -1.79
RORAP35398 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.9□□□□□ -1.79
RORAP35398 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RORAP35398 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
RORAP35398 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RORAP35398 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RORAP35398 Z82217.1-201ENST00000625157 8149 ntBASIC3.9□□□□□ -1.79
RORAP35398 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 AC016588.2-201ENST00000632484 3021 ntBASIC3.89□□□□□ -1.79
RORAP35398 ERCC6-202ENST00000374127 1782 ntBASIC3.89□□□□□ -1.79
RORAP35398 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RORAP35398 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.89□□□□□ -1.79
RORAP35398 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.89□□□□□ -1.79
RORAP35398 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.89□□□□□ -1.79
RORAP35398 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RORAP35398 RPL7P4-203ENST00000430239 730 ntBASIC3.89□□□□□ -1.79
RORAP35398 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.89□□□□□ -1.79
RORAP35398 CBX1P4-201ENST00000439415 457 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC023512.1-201ENST00000444513 499 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RORAP35398 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.89□□□□□ -1.79
RORAP35398 RAD23BP3-201ENST00000454157 1152 ntBASIC3.89□□□□□ -1.79
RORAP35398 RPL36AP13-201ENST00000457490 317 ntBASIC3.89□□□□□ -1.79
RORAP35398 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.89□□□□□ -1.79
RORAP35398 AC079804.1-201ENST00000461922 436 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC087385.1-201ENST00000475062 312 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC010460.1-201ENST00000507087 466 ntBASIC3.89□□□□□ -1.79
RORAP35398 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
RORAP35398 AC108120.2-201ENST00000512973 294 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.89□□□□□ -1.79
RORAP35398 UBTFL9-201ENST00000534504 1148 ntBASIC3.89□□□□□ -1.79
RORAP35398 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.89□□□□□ -1.79
RORAP35398 AC244505.7-201ENST00000599675 272 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.89□□□□□ -1.79
RORAP35398 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.89□□□□□ -1.79
RORAP35398 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC007342.8-201ENST00000623278 678 ntBASIC3.89□□□□□ -1.79
RORAP35398 AC138907.10-201ENST00000623708 983 ntBASIC3.89□□□□□ -1.79
RORAP35398 AP005264.7-201ENST00000625003 745 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms