Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 VN1R78P-201ENST00000597393 564 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 RNF138P2-201ENST00000603490 592 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AL022161.1-201ENST00000604390 213 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC090525.3-201ENST00000605601 189 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC010857.1-201ENST00000606398 594 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 AC123768.4-201ENST00000616244 701 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC022079.2-201ENST00000619739 566 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 AC091304.6-201ENST00000619761 202 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.79□□□□□ -1.64
HOXA11P31270 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HOXA11P31270 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HOXA11P31270 AL133268.1-201ENST00000405676 1401 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.79□□□□□ -1.64
HOXA11P31270 AL158163.1-201ENST00000603915 1649 ntBASIC4.79□□□□□ -1.64
HOXA11P31270 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HOXA11P31270 SMG1P4-204ENST00000523028 4131 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 Z95331.1-201ENST00000623075 23112 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 OR52B1P-201ENST00000316506 909 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 RNA5SP515-201ENST00000364570 118 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 HMGB1P13-201ENST00000406019 642 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 RNU4-22P-201ENST00000411058 166 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 HSFY4P-201ENST00000415994 1181 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA11P31270 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA11P31270 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.78□□□□□ -1.64
HOXA11P31270 AL513175.2-201ENST00000422071 443 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 BX119904.4-201ENST00000424402 301 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA11P31270 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA11P31270 MTCO3P5-201ENST00000433620 714 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 MTND4P32-201ENST00000437189 1237 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AL031663.1-201ENST00000437445 219 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA11P31270 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA11P31270 AC006511.1-201ENST00000470614 315 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA11P31270 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA11P31270 ATP1B1P1-201ENST00000509767 915 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 SNORD116-26-201ENST00000516006 96 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 RNU6-1004P-201ENST00000516584 111 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 OR5BC1P-201ENST00000529327 739 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA11P31270 TOMM20P2-201ENST00000540082 421 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 LSM3P2-201ENST00000551246 273 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 RN7SL435P-201ENST00000584418 282 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AC079610.2-201ENST00000604818 690 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AC008966.2-201ENST00000606157 453 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.78□□□□□ -1.64
HOXA11P31270 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 AP002782.1-201ENST00000623107 614 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AC091905.2-201ENST00000623143 306 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AC116563.2-201ENST00000624751 535 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AC068724.3-201ENST00000625906 87 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AC140479.6-201ENST00000633535 357 ntBASIC4.78□□□□□ -1.64
HOXA11P31270 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
HOXA11P31270 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXA11P31270 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.78□□□□□ -1.64
HOXA11P31270 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HOXA11P31270 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXA11P31270 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.78□□□□□ -1.64
HOXA11P31270 Z73965.1-201ENST00000623412 2297 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 AL513185.3-201ENST00000433335 1300 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
HOXA11P31270 AL592182.3-201ENST00000642132 3304 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXA11P31270 AL121657.1-201ENST00000327215 531 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXA11P31270 RNU5B-1-201ENST00000363286 116 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 RNA5SP479-201ENST00000364858 117 ntBASIC4.77□□□□□ -1.65
HOXA11P31270 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms