Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL8A2P25067 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL8A2P25067 SNORA71.3-201ENST00000362582 128 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 AL133412.1-201ENST00000380194 2992 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.18□□□□□ -1.9
COL8A2P25067 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC069157.1-201ENST00000421749 137 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 RPL7P4-203ENST00000430239 730 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL8A2P25067 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL8A2P25067 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 MTND2P25-201ENST00000449028 610 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 AC022431.1-201ENST00000450941 438 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC034236.1-201ENST00000469891 373 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL8A2P25067 S100A11P1-201ENST00000477525 312 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 AC037198.2-201ENST00000478845 733 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.18□□□□□ -1.9
COL8A2P25067 snoU109.6-201ENST00000516831 118 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.18□□□□□ -1.9
COL8A2P25067 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC024220.1-201ENST00000603675 484 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 OR6R2P-201ENST00000609216 300 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 AC128687.2-201ENST00000609657 566 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 AC079684.1-201ENST00000621405 437 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.18□□□□□ -1.9
COL8A2P25067 AC008725.1-201ENST00000605123 2263 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL8A2P25067 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL8A2P25067 AL627171.1-201ENST00000618845 1308 ntBASIC3.18□□□□□ -1.9
COL8A2P25067 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL8A2P25067 SOD2P1-201ENST00000396543 562 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 ZNF603P-201ENST00000405613 487 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.17□□□□□ -1.9
COL8A2P25067 SYF2P2-201ENST00000417620 583 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 TCEA1P2-201ENST00000420496 906 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 AL390879.2-203ENST00000426943 1121 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC091286.1-201ENST00000431233 461 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC096638.2-201ENST00000434965 711 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 SETD6P1-201ENST00000444575 317 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC243772.1-201ENST00000451620 410 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC091153.1-201ENST00000466297 402 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC022336.1-201ENST00000475510 337 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 RAC1P2-201ENST00000511164 579 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.17□□□□□ -1.9
COL8A2P25067 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL8A2P25067 DEFB109D-201ENST00000529497 240 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 RFPL1S-203ENST00000539579 330 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 GTF2IP22-201ENST00000554443 182 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.17□□□□□ -1.9
COL8A2P25067 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 SNORA62.6-201ENST00000606322 83 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 RNU1-30P-201ENST00000606575 163 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 ATE1-AS1-202ENST00000636460 506 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.17□□□□□ -1.9
COL8A2P25067 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COL8A2P25067 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 UBE3AP2-201ENST00000429033 2259 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 Z73965.1-201ENST00000623412 2297 ntBASIC3.17□□□□□ -1.9
COL8A2P25067 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
COL8A2P25067 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL8A2P25067 AC095050.2-201ENST00000510748 1458 ntBASIC3.16□□□□□ -1.9
COL8A2P25067 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL8A2P25067 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL8A2P25067 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL8A2P25067 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.16□□□□□ -1.9
COL8A2P25067 IPO8P1-201ENST00000455509 3109 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms