Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC079097.1-201ENST00000512187 1399 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AC068870.1-201ENST00000563737 2455 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC114774.1-201ENST00000507410 1770 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TNFSF4P23510 RNA5SP132-201ENST00000364725 118 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 HSPA8P15-201ENST00000401676 786 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 MIR1302-8-201ENST00000408342 128 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 RNU6-920P-201ENST00000410926 92 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 Z99497.1-201ENST00000421282 135 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 ISCA1P2-201ENST00000438679 421 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AL390119.1-201ENST00000440329 312 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC073465.2-201ENST00000440938 498 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC019185.1-201ENST00000442718 389 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.66□□□□□ -1.66
TNFSF4P23510 PAXBP1P1-201ENST00000449315 447 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 RPS20P24-201ENST00000457473 361 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 RN7SL189P-201ENST00000468631 289 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC108693.1-201ENST00000496068 432 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AC117522.2-201ENST00000510049 657 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFSF4P23510 OR4R3P-201ENST00000525084 838 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AP005403.1-201ENST00000579720 229 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.66□□□□□ -1.66
TNFSF4P23510 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AC115286.1-201ENST00000604298 434 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AL162431.4-201ENST00000604674 411 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.66□□□□□ -1.66
TNFSF4P23510 AL139124.1-201ENST00000609123 421 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 MIR7844-201ENST00000616161 122 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 AC007494.3-201ENST00000624660 743 ntBASIC4.66□□□□□ -1.66
TNFSF4P23510 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
TNFSF4P23510 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.66□□□□□ -1.66
TNFSF4P23510 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
TNFSF4P23510 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TNFSF4P23510 AC091046.3-201ENST00000631455 1574 ntBASIC4.65□□□□□ -1.66
TNFSF4P23510 AC017104.4-201ENST00000636283 1592 ntBASIC4.65□□□□□ -1.66
TNFSF4P23510 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.65□□□□□ -1.66
TNFSF4P23510 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFSF4P23510 AL136964.1-201ENST00000622038 2990 ntBASIC4.65□□□□□ -1.66
TNFSF4P23510 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.65□□□□□ -1.66
TNFSF4P23510 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.65□□□□□ -1.66
TNFSF4P23510 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.65□□□□□ -1.66
TNFSF4P23510 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.65□□□□□ -1.66
TNFSF4P23510 AL022578.1-201ENST00000439330 1433 ntBASIC4.65□□□□□ -1.66
TNFSF4P23510 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.65□□□□□ -1.66
TNFSF4P23510 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.65□□□□□ -1.66
TNFSF4P23510 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
TNFSF4P23510 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFSF4P23510 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
TNFSF4P23510 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
TNFSF4P23510 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.65□□□□□ -1.66
TNFSF4P23510 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.65□□□□□ -1.66
TNFSF4P23510 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.65□□□□□ -1.66
TNFSF4P23510 RNU6-433P-201ENST00000363216 104 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.65□□□□□ -1.67
TNFSF4P23510 RNU6-952P-201ENST00000391164 108 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 U3.25-201ENST00000391209 220 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 AC009804.1-201ENST00000400949 179 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.65□□□□□ -1.67
TNFSF4P23510 MTATP6P27-201ENST00000416987 621 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.65□□□□□ -1.67
TNFSF4P23510 AL592293.2-201ENST00000422292 996 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 MED14P1-201ENST00000430517 648 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TNFSF4P23510 AC012075.1-201ENST00000436549 580 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 MUPP-201ENST00000438111 566 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 MTND5P14-201ENST00000441481 1267 ntBASIC4.65□□□□□ -1.67
TNFSF4P23510 H2AFZP5-201ENST00000446960 382 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms