Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC006511.1-201ENST00000470614 315 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC104687.1-201ENST00000485829 412 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC108022.1-201ENST00000493466 478 ntBASIC4.33□□□□□ -1.72
CDH3P22223 PRELID3BP6-201ENST00000503839 571 ntBASIC4.33□□□□□ -1.72
CDH3P22223 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AP000827.1-201ENST00000527814 258 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC118942.1-201ENST00000529674 1035 ntBASIC4.33□□□□□ -1.72
CDH3P22223 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH3P22223 AC011611.5-201ENST00000552477 578 ntBASIC4.33□□□□□ -1.72
CDH3P22223 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AL121594.4-201ENST00000556211 1196 ntBASIC4.33□□□□□ -1.72
CDH3P22223 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH3P22223 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH3P22223 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH3P22223 AC091178.1-203ENST00000584586 279 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AL606834.3-201ENST00000602615 496 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC069431.2-201ENST00000604149 1099 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC008966.2-201ENST00000606157 453 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH3P22223 AL121890.3-201ENST00000618494 516 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC023510.2-201ENST00000622162 746 ntBASIC4.33□□□□□ -1.72
CDH3P22223 AC013437.2-201ENST00000639587 677 ntBASIC4.33□□□□□ -1.72
CDH3P22223 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 AC008725.1-201ENST00000605123 2263 ntBASIC4.33□□□□□ -1.72
CDH3P22223 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH3P22223 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 CPHL1P-201ENST00000461341 3407 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AL031985.3-201ENST00000565390 2449 ntBASIC4.32□□□□□ -1.72
CDH3P22223 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 AL627171.1-201ENST00000618845 1308 ntBASIC4.32□□□□□ -1.72
CDH3P22223 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.32□□□□□ -1.72
CDH3P22223 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 RNU5B-1-201ENST00000363286 116 ntBASIC4.32□□□□□ -1.72
CDH3P22223 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH3P22223 AC136624.1-201ENST00000400791 413 ntBASIC4.32□□□□□ -1.72
CDH3P22223 MIR921-201ENST00000401133 56 ntBASIC4.32□□□□□ -1.72
CDH3P22223 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH3P22223 SNRPFP1-201ENST00000414761 252 ntBASIC4.32□□□□□ -1.72
CDH3P22223 TMSB10P2-201ENST00000416049 131 ntBASIC4.32□□□□□ -1.72
CDH3P22223 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH3P22223 ELOCP6-201ENST00000429066 328 ntBASIC4.32□□□□□ -1.72
CDH3P22223 FTH1P6-201ENST00000430768 320 ntBASIC4.32□□□□□ -1.72
CDH3P22223 YWHAEP5-201ENST00000431545 765 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH3P22223 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH3P22223 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH3P22223 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH3P22223 EIF2S2P2-201ENST00000447161 982 ntBASIC4.32□□□□□ -1.72
CDH3P22223 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH3P22223 AL133477.1-201ENST00000457472 514 ntBASIC4.32□□□□□ -1.72
CDH3P22223 ELOCP12-201ENST00000458706 328 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AC011276.1-201ENST00000469688 323 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH3P22223 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH3P22223 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH3P22223 AC139783.2-201ENST00000504847 1145 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH3P22223 IGHV3-32-201ENST00000519182 355 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH3P22223 AC083923.1-201ENST00000523708 376 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH3P22223 CYB5AP5-201ENST00000549779 389 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AC027104.1-201ENST00000563702 681 ntBASIC4.32□□□□□ -1.72
CDH3P22223 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 AP001160.4-201ENST00000596971 382 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AP002906.1-201ENST00000603405 233 ntBASIC4.32□□□□□ -1.72
CDH3P22223 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH3P22223 AC090912.3-201ENST00000609775 533 ntBASIC4.32□□□□□ -1.72
CDH3P22223 MIR6810-201ENST00000622701 70 ntBASIC4.32□□□□□ -1.72
CDH3P22223 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH3P22223 OR2L1P-202ENST00000641567 1023 ntBASIC4.32□□□□□ -1.72
CDH3P22223 RNF6P1-201ENST00000444889 1784 ntBASIC4.32□□□□□ -1.72
CDH3P22223 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH3P22223 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH3P22223 LINC00622-201ENST00000562811 1570 ntBASIC4.31□□□□□ -1.72
CDH3P22223 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.31□□□□□ -1.72
CDH3P22223 ENSAP3-201ENST00000312710 333 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC126755.2-208ENST00000327792 462 ntBASIC4.31□□□□□ -1.72
CDH3P22223 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CDH3P22223 AC138969.1-213ENST00000331436 462 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RNA5SP509-201ENST00000364577 119 ntBASIC4.31□□□□□ -1.72
CDH3P22223 U6.112-201ENST00000384129 70 ntBASIC4.31□□□□□ -1.72
CDH3P22223 MIR3074-201ENST00000384885 81 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RNU6-298P-201ENST00000390888 96 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RNU4-25P-201ENST00000410569 230 ntBASIC4.31□□□□□ -1.72
CDH3P22223 VN1R51P-201ENST00000411675 945 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH3P22223 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.31□□□□□ -1.72
CDH3P22223 RAD23BP1-201ENST00000421404 1227 ntBASIC4.31□□□□□ -1.72
CDH3P22223 AL592293.2-201ENST00000422292 996 ntBASIC4.31□□□□□ -1.72
CDH3P22223 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms