Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4□□□□□ -1.77
COL11A1P12107 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4□□□□□ -1.77
COL11A1P12107 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
COL11A1P12107 AC234772.1-201ENST00000377927 937 ntBASIC4□□□□□ -1.77
COL11A1P12107 MIR128-1-201ENST00000384921 82 ntBASIC4□□□□□ -1.77
COL11A1P12107 RNA5SP104-201ENST00000410989 118 ntBASIC4□□□□□ -1.77
COL11A1P12107 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4□□□□□ -1.77
COL11A1P12107 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4□□□□□ -1.77
COL11A1P12107 NPM1P39-201ENST00000449818 867 ntBASIC4□□□□□ -1.77
COL11A1P12107 EIF4A1P11-201ENST00000451239 222 ntBASIC4□□□□□ -1.77
COL11A1P12107 RPL26P28-201ENST00000451325 435 ntBASIC4□□□□□ -1.77
COL11A1P12107 AC099563.1-201ENST00000456086 418 ntBASIC4□□□□□ -1.77
COL11A1P12107 FCF1P3-201ENST00000496394 590 ntBASIC4□□□□□ -1.77
COL11A1P12107 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4□□□□□ -1.77
COL11A1P12107 RNU2-27P-201ENST00000516185 142 ntBASIC4□□□□□ -1.77
COL11A1P12107 RNU6-579P-201ENST00000516879 102 ntBASIC4□□□□□ -1.77
COL11A1P12107 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4□□□□□ -1.77
COL11A1P12107 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4□□□□□ -1.77
COL11A1P12107 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4□□□□□ -1.77
COL11A1P12107 AC026422.1-201ENST00000623961 452 ntBASIC4□□□□□ -1.77
COL11A1P12107 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
COL11A1P12107 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A1P12107 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A1P12107 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A1P12107 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.99□□□□□ -1.77
COL11A1P12107 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL11A1P12107 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL11A1P12107 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC3.99□□□□□ -1.77
COL11A1P12107 U3.44-201ENST00000458938 192 ntBASIC3.99□□□□□ -1.77
COL11A1P12107 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.99□□□□□ -1.77
COL11A1P12107 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.99□□□□□ -1.77
COL11A1P12107 FCF1P8-201ENST00000510322 597 ntBASIC3.99□□□□□ -1.77
COL11A1P12107 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.99□□□□□ -1.77
COL11A1P12107 AC027281.1-201ENST00000574178 758 ntBASIC3.99□□□□□ -1.77
COL11A1P12107 AC079880.2-201ENST00000603790 1213 ntBASIC3.99□□□□□ -1.77
COL11A1P12107 MIR486-1-201ENST00000612171 68 ntBASIC3.99□□□□□ -1.77
COL11A1P12107 SNORD39.4-201ENST00000620099 78 ntBASIC3.99□□□□□ -1.77
COL11A1P12107 AC019072.1-201ENST00000604535 1551 ntBASIC3.99□□□□□ -1.77
COL11A1P12107 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 MTND4P26-201ENST00000415971 1359 ntBASIC3.98□□□□□ -1.77
COL11A1P12107 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
COL11A1P12107 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 AC074367.1-201ENST00000438685 1125 ntBASIC3.98□□□□□ -1.77
COL11A1P12107 UBE2DNL-203ENST00000474922 222 ntBASIC3.98□□□□□ -1.77
COL11A1P12107 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 AC098799.1-201ENST00000504752 800 ntBASIC3.98□□□□□ -1.77
COL11A1P12107 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
COL11A1P12107 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.98□□□□□ -1.77
COL11A1P12107 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC3.98□□□□□ -1.77
COL11A1P12107 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.98□□□□□ -1.77
COL11A1P12107 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
COL11A1P12107 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.98□□□□□ -1.77
COL11A1P12107 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC3.98□□□□□ -1.77
COL11A1P12107 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.98□□□□□ -1.77
COL11A1P12107 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 RPL23AP71-201ENST00000470966 469 ntBASIC3.98□□□□□ -1.77
COL11A1P12107 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL11A1P12107 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.98□□□□□ -1.77
COL11A1P12107 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.98□□□□□ -1.77
COL11A1P12107 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.98□□□□□ -1.77
COL11A1P12107 AC135507.2-201ENST00000612443 309 ntBASIC3.98□□□□□ -1.77
COL11A1P12107 AL732618.1-201ENST00000623251 301 ntBASIC3.98□□□□□ -1.77
COL11A1P12107 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.97□□□□□ -1.77
COL11A1P12107 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
COL11A1P12107 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL11A1P12107 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL11A1P12107 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL11A1P12107 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.97□□□□□ -1.77
COL11A1P12107 Y_RNA.111-201ENST00000363248 100 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 RSL24D1P1-201ENST00000404972 493 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 RPF2P1-201ENST00000424137 906 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.97□□□□□ -1.77
COL11A1P12107 AL671855.1-201ENST00000446875 1203 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 MTND6P6-201ENST00000478031 263 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 RPL21P13-201ENST00000488305 481 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 RPL7P38-201ENST00000488396 739 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 PHBP14-201ENST00000512887 367 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 MIR5680-201ENST00000577577 84 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 AC024023.1-201ENST00000624530 922 ntBASIC3.97□□□□□ -1.77
COL11A1P12107 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL11A1P12107 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
COL11A1P12107 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL11A1P12107 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL11A1P12107 AC073073.2-201ENST00000609827 2578 ntBASIC3.96□□□□□ -1.77
COL11A1P12107 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL11A1P12107 AC063923.1-201ENST00000478982 1619 ntBASIC3.96□□□□□ -1.77
COL11A1P12107 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL11A1P12107 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms