Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.4□□□□□ -1.71
VTNP04004 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.4□□□□□ -1.71
VTNP04004 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.4□□□□□ -1.71
VTNP04004 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.4□□□□□ -1.71
VTNP04004 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VTNP04004 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VTNP04004 AC022795.1-201ENST00000473808 480 ntBASIC4.4□□□□□ -1.71
VTNP04004 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.4□□□□□ -1.71
VTNP04004 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.4□□□□□ -1.71
VTNP04004 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.4□□□□□ -1.71
VTNP04004 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.4□□□□□ -1.71
VTNP04004 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VTNP04004 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.4□□□□□ -1.71
VTNP04004 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.4□□□□□ -1.71
VTNP04004 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.4□□□□□ -1.71
VTNP04004 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
VTNP04004 AC079171.1-201ENST00000568788 914 ntBASIC4.4□□□□□ -1.71
VTNP04004 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.4□□□□□ -1.71
VTNP04004 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.4□□□□□ -1.71
VTNP04004 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.4□□□□□ -1.71
VTNP04004 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.4□□□□□ -1.71
VTNP04004 AL049844.2-201ENST00000604280 628 ntBASIC4.4□□□□□ -1.71
VTNP04004 MIR432-201ENST00000606207 94 ntBASIC4.4□□□□□ -1.71
VTNP04004 AC039056.2-201ENST00000622261 511 ntBASIC4.4□□□□□ -1.71
VTNP04004 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.4□□□□□ -1.71
VTNP04004 AL596275.2-204ENST00000641628 552 ntBASIC4.4□□□□□ -1.71
VTNP04004 AL596275.2-206ENST00000641957 626 ntBASIC4.4□□□□□ -1.71
VTNP04004 AC006042.3-201ENST00000454684 1469 ntBASIC4.4□□□□□ -1.71
VTNP04004 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VTNP04004 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VTNP04004 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VTNP04004 MARK2P15-201ENST00000432204 2186 ntBASIC4.4□□□□□ -1.71
VTNP04004 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VTNP04004 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 AC010329.2-201ENST00000595195 2737 ntBASIC4.39□□□□□ -1.71
VTNP04004 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.39□□□□□ -1.71
VTNP04004 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
VTNP04004 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 AC105074.1-201ENST00000623380 3095 ntBASIC4.39□□□□□ -1.71
VTNP04004 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 RNU1-85P-201ENST00000364127 164 ntBASIC4.39□□□□□ -1.71
VTNP04004 MIR142-201ENST00000384835 87 ntBASIC4.39□□□□□ -1.71
VTNP04004 MIR30B-201ENST00000384850 88 ntBASIC4.39□□□□□ -1.71
VTNP04004 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VTNP04004 AL450992.3-201ENST00000413192 568 ntBASIC4.39□□□□□ -1.71
VTNP04004 AL445183.3-201ENST00000414168 502 ntBASIC4.39□□□□□ -1.71
VTNP04004 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
VTNP04004 DPY19L1P2-201ENST00000426647 915 ntBASIC4.39□□□□□ -1.71
VTNP04004 AC007389.2-201ENST00000434630 306 ntBASIC4.39□□□□□ -1.71
VTNP04004 AC006994.1-201ENST00000438212 839 ntBASIC4.39□□□□□ -1.71
VTNP04004 RPS27P5-201ENST00000444247 244 ntBASIC4.39□□□□□ -1.71
VTNP04004 AC099063.2-201ENST00000446360 662 ntBASIC4.39□□□□□ -1.71
VTNP04004 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4.39□□□□□ -1.71
VTNP04004 PPIAP15-201ENST00000479662 484 ntBASIC4.39□□□□□ -1.71
VTNP04004 RN7SL809P-201ENST00000482040 297 ntBASIC4.39□□□□□ -1.71
VTNP04004 HMGB1P19-201ENST00000517578 577 ntBASIC4.39□□□□□ -1.71
VTNP04004 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.39□□□□□ -1.71
VTNP04004 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.39□□□□□ -1.71
VTNP04004 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.39□□□□□ -1.71
VTNP04004 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.39□□□□□ -1.71
VTNP04004 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.39□□□□□ -1.71
VTNP04004 AC112200.1-201ENST00000625015 234 ntBASIC4.39□□□□□ -1.71
VTNP04004 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
VTNP04004 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VTNP04004 AC107027.3-201ENST00000565095 3473 ntBASIC4.38□□□□□ -1.71
VTNP04004 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.38□□□□□ -1.71
VTNP04004 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.38□□□□□ -1.71
VTNP04004 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VTNP04004 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VTNP04004 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 RNU6-481P-201ENST00000384194 107 ntBASIC4.38□□□□□ -1.71
VTNP04004 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTNP04004 AL590704.1-201ENST00000402856 794 ntBASIC4.38□□□□□ -1.71
VTNP04004 RNU6ATAC-201ENST00000408749 126 ntBASIC4.38□□□□□ -1.71
VTNP04004 RNA5SP296-201ENST00000410523 111 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.38□□□□□ -1.71
VTNP04004 AC009302.1-201ENST00000417147 390 ntBASIC4.38□□□□□ -1.71
VTNP04004 PDSS1P1-201ENST00000422953 1114 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC013262.1-201ENST00000426710 252 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.38□□□□□ -1.71
VTNP04004 MTCO1P43-201ENST00000431831 488 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.38□□□□□ -1.71
VTNP04004 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 GEMIN8P3-201ENST00000445417 720 ntBASIC4.38□□□□□ -1.71
VTNP04004 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VTNP04004 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.38□□□□□ -1.71
VTNP04004 AL500522.2-201ENST00000448562 343 ntBASIC4.38□□□□□ -1.71
VTNP04004 AL354710.1-201ENST00000453641 246 ntBASIC4.38□□□□□ -1.71
VTNP04004 CYCSP20-201ENST00000473154 315 ntBASIC4.38□□□□□ -1.71
VTNP04004 RPL21P6-201ENST00000479171 504 ntBASIC4.38□□□□□ -1.71
VTNP04004 SETP6-201ENST00000479329 568 ntBASIC4.38□□□□□ -1.71
VTNP04004 RN7SL323P-201ENST00000494712 295 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms