Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
APOEP02649 OTUD4P1-201ENST00000237841 3067 ntBASIC3.98□□□□□ -1.77
APOEP02649 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
APOEP02649 U1.1-201ENST00000384101 164 ntBASIC3.98□□□□□ -1.77
APOEP02649 HMGN2P8-201ENST00000391458 268 ntBASIC3.98□□□□□ -1.77
APOEP02649 AC025750.1-201ENST00000399891 379 ntBASIC3.98□□□□□ -1.77
APOEP02649 RN7SKP156-201ENST00000410308 342 ntBASIC3.98□□□□□ -1.77
APOEP02649 RN7SKP202-201ENST00000410439 330 ntBASIC3.98□□□□□ -1.77
APOEP02649 SNORA57.3-201ENST00000411095 141 ntBASIC3.98□□□□□ -1.77
APOEP02649 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.98□□□□□ -1.77
APOEP02649 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.98□□□□□ -1.77
APOEP02649 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.98□□□□□ -1.77
APOEP02649 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.98□□□□□ -1.77
APOEP02649 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.98□□□□□ -1.77
APOEP02649 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 AL354710.1-201ENST00000453641 246 ntBASIC3.98□□□□□ -1.77
APOEP02649 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.98□□□□□ -1.77
APOEP02649 AL136097.1-201ENST00000456945 913 ntBASIC3.98□□□□□ -1.77
APOEP02649 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.98□□□□□ -1.77
APOEP02649 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 NARSP2-201ENST00000518524 679 ntBASIC3.98□□□□□ -1.77
APOEP02649 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.98□□□□□ -1.77
APOEP02649 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
APOEP02649 OR8X1P-201ENST00000534542 869 ntBASIC3.98□□□□□ -1.77
APOEP02649 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.98□□□□□ -1.77
APOEP02649 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.98□□□□□ -1.77
APOEP02649 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.98□□□□□ -1.77
APOEP02649 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.98□□□□□ -1.77
APOEP02649 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.98□□□□□ -1.77
APOEP02649 AC087499.8-201ENST00000578406 226 ntBASIC3.98□□□□□ -1.77
APOEP02649 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 U7.8-201ENST00000619968 63 ntBASIC3.98□□□□□ -1.77
APOEP02649 ATE1-AS1-202ENST00000636460 506 ntBASIC3.98□□□□□ -1.77
APOEP02649 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
APOEP02649 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
APOEP02649 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
APOEP02649 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.98□□□□□ -1.77
APOEP02649 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.98□□□□□ -1.77
APOEP02649 AC100871.1-201ENST00000507871 1456 ntBASIC3.98□□□□□ -1.77
APOEP02649 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
APOEP02649 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOEP02649 LINC00561-201ENST00000565815 2738 ntBASIC3.97□□□□□ -1.77
APOEP02649 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOEP02649 SNORD6-201ENST00000365444 73 ntBASIC3.97□□□□□ -1.77
APOEP02649 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
APOEP02649 RN7SKP159-201ENST00000410657 292 ntBASIC3.97□□□□□ -1.77
APOEP02649 CYCSP19-201ENST00000411715 316 ntBASIC3.97□□□□□ -1.77
APOEP02649 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.97□□□□□ -1.77
APOEP02649 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 MTND2P15-201ENST00000418575 892 ntBASIC3.97□□□□□ -1.77
APOEP02649 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 Z74696.2-201ENST00000436514 498 ntBASIC3.97□□□□□ -1.77
APOEP02649 AC092809.1-201ENST00000441469 474 ntBASIC3.97□□□□□ -1.77
APOEP02649 SETD6P1-201ENST00000444575 317 ntBASIC3.97□□□□□ -1.77
APOEP02649 AL359073.1-201ENST00000448036 403 ntBASIC3.97□□□□□ -1.77
APOEP02649 RN7SL93P-201ENST00000463035 293 ntBASIC3.97□□□□□ -1.77
APOEP02649 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 AC007688.1-201ENST00000475592 759 ntBASIC3.97□□□□□ -1.77
APOEP02649 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.97□□□□□ -1.77
APOEP02649 AC004069.2-201ENST00000505438 1114 ntBASIC3.97□□□□□ -1.77
APOEP02649 AC005798.1-201ENST00000513715 387 ntBASIC3.97□□□□□ -1.77
APOEP02649 RNU6-347P-201ENST00000516658 105 ntBASIC3.97□□□□□ -1.77
APOEP02649 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.97□□□□□ -1.77
APOEP02649 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 AL390816.3-201ENST00000604527 1066 ntBASIC3.97□□□□□ -1.77
APOEP02649 Z82195.1-201ENST00000604558 398 ntBASIC3.97□□□□□ -1.77
APOEP02649 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOEP02649 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.97□□□□□ -1.77
APOEP02649 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOEP02649 AC116447.1-201ENST00000613153 453 ntBASIC3.97□□□□□ -1.77
APOEP02649 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOEP02649 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOEP02649 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
APOEP02649 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
APOEP02649 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.97□□□□□ -1.77
APOEP02649 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
APOEP02649 RNU1-18P-201ENST00000363062 164 ntBASIC3.96□□□□□ -1.78
APOEP02649 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
APOEP02649 MIR554-201ENST00000384874 96 ntBASIC3.96□□□□□ -1.78
APOEP02649 AL590704.1-201ENST00000402856 794 ntBASIC3.96□□□□□ -1.78
APOEP02649 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.96□□□□□ -1.78
APOEP02649 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC3.96□□□□□ -1.78
APOEP02649 AL390879.2-203ENST00000426943 1121 ntBASIC3.96□□□□□ -1.78
APOEP02649 AL591419.1-201ENST00000427423 339 ntBASIC3.96□□□□□ -1.78
APOEP02649 RPL23AP4-201ENST00000427757 463 ntBASIC3.96□□□□□ -1.78
APOEP02649 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.96□□□□□ -1.78
APOEP02649 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.96□□□□□ -1.78
APOEP02649 RPS20P21-201ENST00000466859 343 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms