Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.32□□□□□ -1.72
COL1A1P02452 MIR486-1-201ENST00000612171 68 ntBASIC4.32□□□□□ -1.72
COL1A1P02452 AC118273.1-201ENST00000525324 3006 ntBASIC4.32□□□□□ -1.72
COL1A1P02452 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.32□□□□□ -1.72
COL1A1P02452 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.32□□□□□ -1.72
COL1A1P02452 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
COL1A1P02452 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.32□□□□□ -1.72
COL1A1P02452 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.32□□□□□ -1.72
COL1A1P02452 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.32□□□□□ -1.72
COL1A1P02452 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL1A1P02452 CDY3P-201ENST00000454543 1618 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 U3.19-201ENST00000390893 196 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.31□□□□□ -1.72
COL1A1P02452 AL512649.1-201ENST00000428997 581 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 AL356535.1-201ENST00000440335 398 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 AC010655.1-201ENST00000449336 292 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 AC099563.1-201ENST00000456086 418 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 AC069499.1-201ENST00000489433 509 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 RPS26P24-201ENST00000497656 331 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 RN7SKP209-201ENST00000516888 304 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 AC008489.1-201ENST00000524271 483 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 NCAPGP2-201ENST00000557911 754 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 AC027281.1-201ENST00000574178 758 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.31□□□□□ -1.72
COL1A1P02452 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.31□□□□□ -1.72
COL1A1P02452 AL732618.1-201ENST00000623251 301 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL1A1P02452 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL1A1P02452 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.31□□□□□ -1.72
COL1A1P02452 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL1A1P02452 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.31□□□□□ -1.72
COL1A1P02452 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL1A1P02452 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.31□□□□□ -1.72
COL1A1P02452 AC012078.1-201ENST00000405035 1646 ntBASIC4.31□□□□□ -1.72
COL1A1P02452 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
COL1A1P02452 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.3□□□□□ -1.72
COL1A1P02452 IFNNP1-201ENST00000429219 553 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 RPL21P10-201ENST00000463521 490 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.3□□□□□ -1.72
COL1A1P02452 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.3□□□□□ -1.72
COL1A1P02452 AP006245.1-201ENST00000522549 120 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.3□□□□□ -1.72
COL1A1P02452 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.3□□□□□ -1.72
COL1A1P02452 MIR5186-201ENST00000577504 120 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 YPEL5P2-201ENST00000605553 359 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.3□□□□□ -1.72
COL1A1P02452 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL1A1P02452 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.3□□□□□ -1.72
COL1A1P02452 AC017007.4-201ENST00000503353 1352 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL1A1P02452 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL1A1P02452 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
COL1A1P02452 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL1A1P02452 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL1A1P02452 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL1A1P02452 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.3□□□□□ -1.72
COL1A1P02452 RPS24P12-201ENST00000402084 394 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.3□□□□□ -1.72
COL1A1P02452 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.3□□□□□ -1.72
COL1A1P02452 AC236972.1-201ENST00000433225 199 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.3□□□□□ -1.72
COL1A1P02452 FTH1P24-201ENST00000503502 462 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.3□□□□□ -1.72
COL1A1P02452 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.3□□□□□ -1.72
COL1A1P02452 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.3□□□□□ -1.72
COL1A1P02452 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.3□□□□□ -1.72
COL1A1P02452 AC005476.1-201ENST00000554427 397 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 AC067852.3-201ENST00000589177 561 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 KLKP1-201ENST00000595979 403 ntBASIC4.3□□□□□ -1.72
COL1A1P02452 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.29□□□□□ -1.72
COL1A1P02452 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
COL1A1P02452 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.29□□□□□ -1.72
COL1A1P02452 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.29□□□□□ -1.72
COL1A1P02452 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 RNA5SP42-201ENST00000364278 115 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL1A1P02452 AL122016.1-201ENST00000403365 367 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 MTHFD2P2-201ENST00000407725 247 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 RN7SKP111-201ENST00000410349 271 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.29□□□□□ -1.72
COL1A1P02452 U3.44-201ENST00000458938 192 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 RPL23AP71-201ENST00000470966 469 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 AC084357.1-201ENST00000473404 255 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 AL049873.1-201ENST00000480540 376 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 AC073522.1-201ENST00000483312 377 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
COL1A1P02452 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.29□□□□□ -1.72
COL1A1P02452 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 HMGB3P13-201ENST00000511263 607 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.29□□□□□ -1.72
COL1A1P02452 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.29□□□□□ -1.72
COL1A1P02452 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.29□□□□□ -1.72
COL1A1P02452 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.29□□□□□ -1.72
COL1A1P02452 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms