Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTDNEP1O95476 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC011155.1-201ENST00000316512 456 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTDNEP1O95476 FRG1CP-201ENST00000358464 769 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CTDNEP1O95476 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC093719.1-202ENST00000392735 373 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 Z98941.1-201ENST00000407764 100 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 RHEBP3-201ENST00000411920 351 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC127526.1-201ENST00000417526 366 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 EIF2S2P3-201ENST00000428356 999 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AL365396.1-201ENST00000430854 671 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AL353597.2-202ENST00000434901 373 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 RRM2P4-201ENST00000441721 562 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 RPS3AP46-201ENST00000448352 682 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 EIF4A1P11-201ENST00000451239 222 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 RN7SL594P-201ENST00000470590 287 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC105918.1-201ENST00000474399 838 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 ACTR3P3-201ENST00000480448 893 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTDNEP1O95476 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 TOMM20P2-201ENST00000540082 421 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 DUXAP6-201ENST00000553858 601 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC068446.3-201ENST00000555285 382 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC020914.6-201ENST00000594327 272 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 AP005212.4-201ENST00000614206 710 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AC039056.2-201ENST00000622261 511 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CTDNEP1O95476 RPS4XP5-202ENST00000449995 1334 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 ZNF285B-201ENST00000561698 1767 ntBASIC4.11□□□□□ -1.75
CTDNEP1O95476 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.11□□□□□ -1.75
CTDNEP1O95476 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTDNEP1O95476 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CTDNEP1O95476 FABP12P1-201ENST00000401911 322 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 HMGB3P18-201ENST00000406327 590 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 RAC1P3-201ENST00000416129 580 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC096644.3-201ENST00000416788 338 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC018635.1-201ENST00000468292 1030 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC020898.1-201ENST00000474167 787 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC026784.1-201ENST00000507986 352 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 RNU1-95P-201ENST00000516357 160 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 RNU1-128P-201ENST00000516704 160 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC090819.1-201ENST00000523800 1111 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AL391497.1-201ENST00000608671 547 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC069209.1-201ENST00000619282 651 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 AL451142.2-201ENST00000429076 2090 ntBASIC4.1□□□□□ -1.75
CTDNEP1O95476 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.1□□□□□ -1.75
CTDNEP1O95476 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 OTUD4P1-201ENST00000237841 3067 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTDNEP1O95476 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CTDNEP1O95476 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTDNEP1O95476 AL590704.1-201ENST00000402856 794 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 AC068533.1-201ENST00000418542 415 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CTDNEP1O95476 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 U3.44-201ENST00000458938 192 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 PLGLA-201ENST00000465668 449 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 AC005726.1-201ENST00000494679 427 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 VTA1P2-201ENST00000520205 911 ntBASIC4.09□□□□□ -1.75
CTDNEP1O95476 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.09□□□□□ -1.75
CTDNEP1O95476 AC084033.1-201ENST00000550830 633 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms