Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL365203.2-201ENST00000423444 196 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AL593851.1-201ENST00000426171 157 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC092013.1-201ENST00000438795 332 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AL445567.1-201ENST00000439121 144 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC011753.3-201ENST00000443436 406 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 MRPL48P1-201ENST00000445390 636 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.24□□□□□ -1.73
ZIC3O60481 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.24□□□□□ -1.73
ZIC3O60481 RPL5P22-201ENST00000480199 884 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AC008897.1-201ENST00000494006 347 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC010587.2-201ENST00000511727 448 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
ZIC3O60481 RFPL4AP5-201ENST00000514977 504 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 RNU6-513P-201ENST00000516104 104 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ZIC3O60481 AP001207.1-201ENST00000524051 481 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 ELOCP32-201ENST00000548625 324 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC090888.1-201ENST00000561335 1141 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC135628.1-201ENST00000568867 534 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 MIR4999-201ENST00000585029 91 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC010620.1-201ENST00000601088 1102 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 VN1R82P-201ENST00000601481 356 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 uc_338.18-201ENST00000615451 175 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 AC116618.1-201ENST00000634617 774 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 AP000526.1-201ENST00000603308 1388 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ZIC3O60481 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
ZIC3O60481 DBF4P1-201ENST00000412976 1892 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
ZIC3O60481 USP9YP4-201ENST00000424401 1745 ntBASIC4.24□□□□□ -1.73
ZIC3O60481 AL731532.2-201ENST00000623542 1953 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.23□□□□□ -1.73
ZIC3O60481 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 AL022322.2-201ENST00000624072 20397 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
ZIC3O60481 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
ZIC3O60481 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.23□□□□□ -1.73
ZIC3O60481 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 IL6STP1-201ENST00000346911 1020 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 RNU6-1066P-201ENST00000363573 105 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 RNA5SP505-201ENST00000364748 108 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 RNU6-621P-201ENST00000364752 109 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 SUGT1P1-201ENST00000379514 476 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 RNU6-398P-201ENST00000384143 109 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 SKINT1L-201ENST00000401057 817 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AL133264.1-201ENST00000407157 562 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 MTND4P20-201ENST00000424125 869 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 AL138878.2-201ENST00000440581 1241 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 CEACAMP9-201ENST00000442990 513 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AL606662.1-201ENST00000445763 553 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AL034418.1-201ENST00000448675 860 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AL109741.2-201ENST00000455561 343 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 AC090142.1-201ENST00000465776 462 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AC006511.1-201ENST00000470614 315 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 RPL23AP72-201ENST00000492447 435 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZIC3O60481 HMGB3P16-201ENST00000508037 287 ntBASIC4.23□□□□□ -1.73
ZIC3O60481 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.23□□□□□ -1.73
ZIC3O60481 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.23□□□□□ -1.73
ZIC3O60481 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.23□□□□□ -1.73
ZIC3O60481 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.23□□□□□ -1.73
ZIC3O60481 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms