Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.31□□□□□ -1.4
CUX2O14529 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC6.31□□□□□ -1.4
CUX2O14529 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC6.31□□□□□ -1.4
CUX2O14529 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.31□□□□□ -1.4
CUX2O14529 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC6.31□□□□□ -1.4
CUX2O14529 AC006511.1-201ENST00000470614 315 ntBASIC6.31□□□□□ -1.4
CUX2O14529 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.31□□□□□ -1.4
CUX2O14529 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.31□□□□□ -1.4
CUX2O14529 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC6.31□□□□□ -1.4
CUX2O14529 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.31□□□□□ -1.4
CUX2O14529 AC073657.2-201ENST00000605661 303 ntBASIC6.31□□□□□ -1.4
CUX2O14529 AL354976.1-201ENST00000613843 387 ntBASIC6.31□□□□□ -1.4
CUX2O14529 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.31□□□□□ -1.4
CUX2O14529 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CUX2O14529 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC6.31□□□□□ -1.4
CUX2O14529 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CUX2O14529 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC6.31□□□□□ -1.4
CUX2O14529 AC068254.2-201ENST00000623938 3577 ntBASIC6.31□□□□□ -1.4
CUX2O14529 RNU6-729P-201ENST00000384399 107 ntBASIC6.3□□□□□ -1.4
CUX2O14529 RNA5SP306-201ENST00000411087 107 ntBASIC6.3□□□□□ -1.4
CUX2O14529 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.3□□□□□ -1.4
CUX2O14529 BX842559.1-201ENST00000419615 532 ntBASIC6.3□□□□□ -1.4
CUX2O14529 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.3□□□□□ -1.4
CUX2O14529 AL035458.1-201ENST00000433096 585 ntBASIC6.3□□□□□ -1.4
CUX2O14529 FDX1P2-201ENST00000450769 375 ntBASIC6.3□□□□□ -1.4
CUX2O14529 KATNBL1P4-201ENST00000503545 918 ntBASIC6.3□□□□□ -1.4
CUX2O14529 AC025554.1-201ENST00000505641 188 ntBASIC6.3□□□□□ -1.4
CUX2O14529 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.3□□□□□ -1.4
CUX2O14529 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.3□□□□□ -1.4
CUX2O14529 AC006116.10-201ENST00000591836 581 ntBASIC6.3□□□□□ -1.4
CUX2O14529 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.3□□□□□ -1.4
CUX2O14529 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CUX2O14529 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CUX2O14529 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUX2O14529 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.3□□□□□ -1.4
CUX2O14529 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUX2O14529 AC024341.1-201ENST00000526444 1552 ntBASIC6.3□□□□□ -1.4
CUX2O14529 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUX2O14529 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUX2O14529 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.3□□□□□ -1.4
CUX2O14529 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
CUX2O14529 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CUX2O14529 SAMMSON-213ENST00000641336 1521 ntBASIC6.29□□□□□ -1.4
CUX2O14529 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CUX2O14529 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.29□□□□□ -1.4
CUX2O14529 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.29□□□□□ -1.4
CUX2O14529 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC6.29□□□□□ -1.4
CUX2O14529 RNA5SP208-201ENST00000516156 78 ntBASIC6.29□□□□□ -1.4
CUX2O14529 AC105036.1-201ENST00000566222 271 ntBASIC6.29□□□□□ -1.4
CUX2O14529 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.29□□□□□ -1.4
CUX2O14529 AP003392.5-201ENST00000607857 415 ntBASIC6.29□□□□□ -1.4
CUX2O14529 AL773545.4-201ENST00000637262 310 ntBASIC6.29□□□□□ -1.4
CUX2O14529 AL513478.4-201ENST00000641636 310 ntBASIC6.29□□□□□ -1.4
CUX2O14529 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUX2O14529 HCFC2P1-201ENST00000392864 1592 ntBASIC6.29□□□□□ -1.4
CUX2O14529 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CUX2O14529 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUX2O14529 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CUX2O14529 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CUX2O14529 AP000542.2-201ENST00000623199 6179 ntBASIC6.28□□□□□ -1.4
CUX2O14529 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CUX2O14529 RNU6-304P-201ENST00000364855 107 ntBASIC6.28□□□□□ -1.4
CUX2O14529 SNORD17-201ENST00000390930 237 ntBASIC6.28□□□□□ -1.4
CUX2O14529 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.28□□□□□ -1.4
CUX2O14529 AC114982.2-201ENST00000461396 358 ntBASIC6.28□□□□□ -1.4
CUX2O14529 RPL23AP12-201ENST00000467573 473 ntBASIC6.28□□□□□ -1.4
CUX2O14529 NPM1P29-201ENST00000483112 803 ntBASIC6.28□□□□□ -1.4
CUX2O14529 AL035404.1-201ENST00000497982 568 ntBASIC6.28□□□□□ -1.4
CUX2O14529 RNA5SP356-201ENST00000515972 94 ntBASIC6.28□□□□□ -1.4
CUX2O14529 OR4A12P-201ENST00000530847 918 ntBASIC6.28□□□□□ -1.4
CUX2O14529 MIR4524B-201ENST00000581569 115 ntBASIC6.28□□□□□ -1.4
CUX2O14529 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.28□□□□□ -1.4
CUX2O14529 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.28□□□□□ -1.4
CUX2O14529 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CUX2O14529 Z95331.1-201ENST00000623075 23112 ntBASIC6.28□□□□□ -1.4
CUX2O14529 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUX2O14529 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUX2O14529 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUX2O14529 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC6.28□□□□□ -1.4
CUX2O14529 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CUX2O14529 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CUX2O14529 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CUX2O14529 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.28□□□□□ -1.4
CUX2O14529 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CUX2O14529 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC6.28□□□□□ -1.4
CUX2O14529 DBIP2-201ENST00000419076 262 ntBASIC6.28□□□□□ -1.4
CUX2O14529 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.28□□□□□ -1.4
CUX2O14529 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.28□□□□□ -1.4
CUX2O14529 SEPT14P1-201ENST00000458703 648 ntBASIC6.28□□□□□ -1.4
CUX2O14529 PPBPP1-201ENST00000510807 373 ntBASIC6.28□□□□□ -1.4
CUX2O14529 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.28□□□□□ -1.4
CUX2O14529 AC006539.2-201ENST00000601729 572 ntBASIC6.28□□□□□ -1.4
CUX2O14529 AL390838.2-201ENST00000602394 274 ntBASIC6.28□□□□□ -1.4
CUX2O14529 IGHV3-29-201ENST00000604817 344 ntBASIC6.28□□□□□ -1.4
CUX2O14529 AC084036.1-201ENST00000609190 508 ntBASIC6.28□□□□□ -1.4
CUX2O14529 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.27□□□□□ -1.4
CUX2O14529 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CUX2O14529 AL359693.1-201ENST00000614959 2407 ntBASIC6.27□□□□□ -1.41
CUX2O14529 AC006484.1-201ENST00000435086 1884 ntBASIC6.27□□□□□ -1.41
CUX2O14529 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms