Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM38O00635 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
TRIM38O00635 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM38O00635 CYP1D1P-201ENST00000416662 1433 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM38O00635 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 MIR192-201ENST00000384915 110 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM38O00635 SNORD65.1-201ENST00000390889 71 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 MTND4LP20-201ENST00000402379 270 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 AL590139.1-201ENST00000416267 400 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 SEPT2P1-201ENST00000419651 180 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 RPL36AP10-201ENST00000421785 322 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 USP9YP31-201ENST00000431405 881 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 RPS20P1-201ENST00000434853 354 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 MTND1P4-201ENST00000435196 415 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM38O00635 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 MTND4P18-201ENST00000447010 465 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 PTENP1-201ENST00000447117 1215 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AL031584.1-201ENST00000447169 754 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 RPL7P59-201ENST00000447700 943 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AL034418.1-201ENST00000448675 860 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM38O00635 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM38O00635 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM38O00635 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC006427.1-201ENST00000514359 712 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 OR5M2P-201ENST00000529003 936 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC074029.1-201ENST00000552531 1044 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC084757.1-201ENST00000559987 490 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM38O00635 MIR4737-201ENST00000583979 81 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC008687.2-201ENST00000597865 520 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC107952.2-201ENST00000606048 486 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC090948.2-201ENST00000607363 564 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 AL161616.1-201ENST00000611867 286 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 MIR378J-201ENST00000611988 109 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC006338.2-201ENST00000616864 791 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 AC017037.3-201ENST00000625016 472 ntBASIC5.01□□□□□ -1.61
TRIM38O00635 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM38O00635 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM38O00635 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM38O00635 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM38O00635 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
TRIM38O00635 Z99496.1-201ENST00000469424 1477 ntBASIC5□□□□□ -1.61
TRIM38O00635 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5□□□□□ -1.61
TRIM38O00635 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
TRIM38O00635 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5□□□□□ -1.61
TRIM38O00635 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM38O00635 AC025125.1-201ENST00000624743 1922 ntBASIC5□□□□□ -1.61
TRIM38O00635 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM38O00635 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM38O00635 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM38O00635 RNU6-623P-201ENST00000363143 105 ntBASIC5□□□□□ -1.61
TRIM38O00635 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5□□□□□ -1.61
TRIM38O00635 MTCO1P21-201ENST00000416634 589 ntBASIC5□□□□□ -1.61
TRIM38O00635 OFD1P11Y-201ENST00000418213 1177 ntBASIC5□□□□□ -1.61
TRIM38O00635 AC013429.2-201ENST00000418798 781 ntBASIC5□□□□□ -1.61
TRIM38O00635 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5□□□□□ -1.61
TRIM38O00635 RAB11AP1-201ENST00000442978 646 ntBASIC5□□□□□ -1.61
TRIM38O00635 AC011753.3-201ENST00000443436 406 ntBASIC5□□□□□ -1.61
TRIM38O00635 MTND2P19-201ENST00000449129 1012 ntBASIC5□□□□□ -1.61
TRIM38O00635 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5□□□□□ -1.61
TRIM38O00635 RPS15AP1-201ENST00000457423 391 ntBASIC5□□□□□ -1.61
TRIM38O00635 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5□□□□□ -1.61
TRIM38O00635 RN7SL189P-201ENST00000468631 289 ntBASIC5□□□□□ -1.61
TRIM38O00635 RN7SL459P-201ENST00000481078 302 ntBASIC5□□□□□ -1.61
TRIM38O00635 AC034244.1-201ENST00000507687 207 ntBASIC5□□□□□ -1.61
TRIM38O00635 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5□□□□□ -1.61
TRIM38O00635 SNORD116-26-201ENST00000516006 96 ntBASIC5□□□□□ -1.61
TRIM38O00635 SOD1P3-201ENST00000518682 454 ntBASIC5□□□□□ -1.61
TRIM38O00635 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5□□□□□ -1.61
TRIM38O00635 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM38O00635 AC009094.1-201ENST00000564443 426 ntBASIC5□□□□□ -1.61
TRIM38O00635 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC5□□□□□ -1.61
TRIM38O00635 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5□□□□□ -1.61
TRIM38O00635 AC069366.1-201ENST00000583159 838 ntBASIC5□□□□□ -1.61
TRIM38O00635 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
TRIM38O00635 BNIP3P30-201ENST00000601184 574 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms