Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
TRIM49D1C9J1S8 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 RLIMP1-201ENST00000339626 1680 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 SNORA27.3-201ENST00000364937 134 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AMZ2P2-201ENST00000406819 1057 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AL450992.3-201ENST00000413192 568 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 ELOCP3-201ENST00000439303 348 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 Z99127.2-201ENST00000441426 334 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 CLIC4P1-201ENST00000453177 535 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 PCNAP1-201ENST00000505363 709 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC018797.3-201ENST00000513388 1241 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 RNU6-760P-201ENST00000516078 97 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC040174.2-201ENST00000602701 465 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC123786.2-201ENST00000603459 275 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 Z82195.1-201ENST00000604558 398 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC005972.3-201ENST00000606304 481 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC092953.2-201ENST00000608000 699 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 MIR6867-201ENST00000610636 67 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 MLECP1-201ENST00000615893 709 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 AC119674.1-220ENST00000641502 1048 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 MAPK10-372ENST00000641954 3413 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 OR10AB1P-202ENST00000641219 1686 ntBASIC3.75□□□□□ -1.81
TRIM49D1C9J1S8 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 OR11H5P-202ENST00000641612 1325 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 Y_RNA.110-201ENST00000363220 99 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 RPL21P65-201ENST00000406094 466 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AL356095.1-201ENST00000417217 199 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC127526.1-201ENST00000417526 366 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 FAR1P1-201ENST00000427163 934 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 DDX6P1-205ENST00000441966 1436 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC006480.1-201ENST00000449887 378 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 IFNWP4-201ENST00000453148 294 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AL354710.1-201ENST00000453641 246 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 NPM1P17-201ENST00000479221 602 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 RPS3AP50-201ENST00000487064 803 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 RN7SKP122-201ENST00000515923 296 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 NPM1P52-201ENST00000518264 846 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC074029.2-201ENST00000551045 634 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC006960.3-201ENST00000561845 705 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 KPNA2P3-201ENST00000584190 848 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 HMGB1P51-201ENST00000605166 638 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC005014.3-201ENST00000605985 190 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC005962.2-201ENST00000611427 652 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AL645927.2-201ENST00000618350 349 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AL356490.1-201ENST00000623079 479 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC090506.2-201ENST00000624521 419 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AC106730.3-201ENST00000624568 641 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 MIR6830-201ENST00000636015 70 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 AF001550.2-201ENST00000636643 217 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 OR52H1-202ENST00000641796 1061 ntBASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.74□□□□□ -1.81
TRIM49D1C9J1S8 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM49D1C9J1S8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms