Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL390816.3-201ENST00000604527 1066 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC113194.1-201ENST00000606037 500 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 LINC00216-201ENST00000623548 1126 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC124312.6-202ENST00000623624 418 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AC024023.1-201ENST00000624530 922 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 MIR7153-201ENST00000637758 57 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 AL021368.2-201ENST00000606125 5352 ntBASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RBFOX3A6NFN3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 PWAR6-201ENST00000552334 4618 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 SNORA11F-201ENST00000408237 128 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 SNORA57.3-201ENST00000411095 141 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC010385.1-201ENST00000412374 256 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AL157831.1-201ENST00000426134 473 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 RPL23AP46-201ENST00000438548 490 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC083863.1-201ENST00000438811 231 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 HMGB1P37-201ENST00000439613 609 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 TXNP1-201ENST00000441872 371 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 ARL5AP2-201ENST00000444698 533 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 RPS20P21-201ENST00000466859 343 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC109327.1-201ENST00000471666 403 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 RPS29P22-201ENST00000472363 168 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC078817.1-201ENST00000492623 435 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 RPL5P23-201ENST00000496040 868 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 RN7SKP209-201ENST00000516888 304 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 RN7SKP60-201ENST00000516985 239 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 MIR4700-201ENST00000578311 74 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 MIR4738-201ENST00000579134 87 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC242628.1-201ENST00000606810 391 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 MIR6864-201ENST00000617935 70 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 CDRT1-208ENST00000630868 794 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC138649.5-201ENST00000637456 137 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC012618.3-205ENST00000637896 1496 ntBASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RBFOX3A6NFN3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 RNA5SP391-201ENST00000363456 119 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 RNA5SP87-201ENST00000384155 118 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 SNORA70E-201ENST00000384492 135 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AL583835.1-201ENST00000399570 407 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 RPS4XP9-201ENST00000405151 780 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 PTP4A1P5-201ENST00000420305 455 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 OR5AW1P-201ENST00000426334 1006 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 HMGB3P5-201ENST00000428894 612 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 UBE2V2P3-201ENST00000433562 437 ntBASIC3.12□□□□□ -1.91
RBFOX3A6NFN3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 178.8 ms