Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
SMIM28A0A1B0GU29 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 SNORA71.3-201ENST00000362582 128 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 RHOT1P2-201ENST00000366423 333 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 Z86062.1-201ENST00000406773 777 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AL357078.2-201ENST00000416486 427 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AC087650.1-201ENST00000431445 468 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 MTND4LP7-201ENST00000431728 294 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 CACYBPP1-201ENST00000438592 684 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AL157827.1-201ENST00000447622 132 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 MTND5P8-201ENST00000449817 1083 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AL354710.1-201ENST00000453641 246 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 HMGN1P11-201ENST00000508668 303 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 HMGB1P19-201ENST00000517578 577 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AC026403.1-201ENST00000518938 295 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AC053481.3-201ENST00000577881 843 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AC242628.1-201ENST00000606810 391 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AL021368.1-201ENST00000607490 540 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 MIR6075-201ENST00000620782 95 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AC010329.2-201ENST00000595195 2737 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 AC007342.7-201ENST00000624610 2337 ntBASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
SMIM28A0A1B0GU29 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 MTND4P21-201ENST00000453886 1357 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 RNA5SP51-201ENST00000364750 119 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 MIR449B-201ENST00000384995 97 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 MIR93-201ENST00000385024 80 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC093719.1-202ENST00000392735 373 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AL034374.1-201ENST00000406329 351 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 USP9YP19-201ENST00000412165 485 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC091286.1-201ENST00000431233 461 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AL353597.2-202ENST00000434901 373 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 RNA5SP154-201ENST00000516193 111 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 RNU6-1308P-201ENST00000516817 103 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 HMGB1P46-201ENST00000520062 610 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC087272.1-201ENST00000523624 533 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC023158.1-201ENST00000561632 1025 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 BNIP3P33-201ENST00000598912 569 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 MTCO3P22-201ENST00000603219 784 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC084373.1-201ENST00000603311 235 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC017002.4-201ENST00000604721 1525 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 AC100871.1-201ENST00000507871 1456 ntBASIC4.04□□□□□ -1.76
SMIM28A0A1B0GU29 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 CASC19-284ENST00000642142 1868 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AC090971.4-201ENST00000560291 1800 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 CYCSP10-201ENST00000417973 294 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 MTND2P25-201ENST00000449028 610 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 APOOP2-201ENST00000461561 539 ntBASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.03□□□□□ -1.76
SMIM28A0A1B0GU29 AP000942.1-201ENST00000463969 747 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms