Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 USP12PY-201ENST00000427677 1064 ntBASIC4.56□□□□□ -1.68
SCN11AQ9UI33 AC006994.1-201ENST00000438212 839 ntBASIC4.56□□□□□ -1.68
SCN11AQ9UI33 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 MIR4276-201ENST00000584832 70 ntBASIC4.56□□□□□ -1.68
SCN11AQ9UI33 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 MTCO1P46-201ENST00000451639 1491 ntBASIC4.56□□□□□ -1.68
SCN11AQ9UI33 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SCN11AQ9UI33 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 MIR93-201ENST00000385024 80 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 NPM1P48-201ENST00000436002 853 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AC091862.1-201ENST00000438016 1100 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 RPL37P3-201ENST00000456825 293 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 MIR4513-201ENST00000581077 86 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AL596275.2-204ENST00000641628 552 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AL596275.2-206ENST00000641957 626 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AC007656.2-201ENST00000624902 4547 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AC068254.2-201ENST00000623938 3577 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 OR2X1P-201ENST00000421144 687 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 U3.44-201ENST00000458938 192 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AC084357.1-201ENST00000473404 255 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 DPRXP4-201ENST00000578053 568 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.55□□□□□ -1.68
SCN11AQ9UI33 CKS1BP3-201ENST00000600888 237 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.55□□□□□ -1.68
SCN11AQ9UI33 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 VN1R51P-201ENST00000411675 945 ntBASIC4.54□□□□□ -1.68
SCN11AQ9UI33 NPM1P39-201ENST00000449818 867 ntBASIC4.54□□□□□ -1.68
SCN11AQ9UI33 AC008489.1-201ENST00000524271 483 ntBASIC4.54□□□□□ -1.68
SCN11AQ9UI33 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 AC067852.3-201ENST00000589177 561 ntBASIC4.54□□□□□ -1.68
SCN11AQ9UI33 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.54□□□□□ -1.68
SCN11AQ9UI33 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 AL357075.1-201ENST00000404107 726 ntBASIC4.53□□□□□ -1.68
SCN11AQ9UI33 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.53□□□□□ -1.68
SCN11AQ9UI33 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 MIR4325-201ENST00000583049 90 ntBASIC4.53□□□□□ -1.68
SCN11AQ9UI33 AC125494.3-201ENST00000602759 455 ntBASIC4.53□□□□□ -1.68
SCN11AQ9UI33 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SCN11AQ9UI33 U3.26-201ENST00000391236 204 ntBASIC4.53□□□□□ -1.69
SCN11AQ9UI33 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SCN11AQ9UI33 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
SCN11AQ9UI33 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.53□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms