Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 AC073544.1-201ENST00000600110 1595 ntBASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 AC005224.3-201ENST00000584683 2140 ntBASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 AL137141.1-201ENST00000624622 4836 ntBASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.96□□□□□ -1.46
VTI1BQ9UEU0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AL451142.2-201ENST00000429076 2090 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC015799.1-201ENST00000622996 3122 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 OR5J1P-201ENST00000313544 939 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RNA5SP258-201ENST00000362750 119 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 Y_RNA.295-201ENST00000364918 102 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RNA5SP198-201ENST00000410376 127 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RN7SKP121-201ENST00000410842 305 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC245096.1-201ENST00000413104 546 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 Z95327.2-201ENST00000414579 1873 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 OSTCP4-201ENST00000424397 449 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RPS7P14-201ENST00000426405 583 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 PRPF38AP1-201ENST00000451976 933 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RPS27P20-201ENST00000492051 246 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RPS4XP18-201ENST00000495480 763 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC098799.2-201ENST00000509466 868 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 WBP1LP3-201ENST00000523033 208 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AP001646.1-201ENST00000527936 915 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AL356432.3-201ENST00000568952 465 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RN7SL230P-201ENST00000580835 303 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RNU4ATAC-201ENST00000580972 127 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 H3F3BP2-201ENST00000583907 357 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC011477.5-201ENST00000586571 259 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC006115.2-201ENST00000596823 202 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC141002.1-201ENST00000607025 279 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RN7SL261P-201ENST00000613441 282 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AL359314.1-201ENST00000616913 261 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC139792.3-201ENST00000623525 224 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 AC091953.2-201ENST00000623979 160 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 THAP12P9-201ENST00000503971 2360 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 MTND5P33-201ENST00000571250 1450 ntBASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VTI1BQ9UEU0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 NUP58P1-201ENST00000502546 1738 ntBASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 AL049697.2-201ENST00000403708 294 ntBASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 SNRPEP6-201ENST00000407465 277 ntBASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 MYL6P5-201ENST00000412707 459 ntBASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VTI1BQ9UEU0 AC069213.2-201ENST00000420238 366 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms