Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ARL2BPP3-201ENST00000421226 480 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 RPL7P2-201ENST00000427639 268 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AL035458.1-201ENST00000433096 585 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 TBCAP1-201ENST00000436520 327 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 RPL12P46-201ENST00000436610 195 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 RPS29P7-201ENST00000439662 171 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 CDC27P1-201ENST00000445384 715 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 RPS11P1-201ENST00000451072 473 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 NPM1P41-201ENST00000512920 831 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 RNA5SP154-201ENST00000516193 111 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 MTND1P6-201ENST00000523621 946 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC093014.1-201ENST00000548926 724 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC091516.1-201ENST00000549191 703 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC012417.1-201ENST00000582307 1039 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AL592436.1-201ENST00000605135 558 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AL451086.1-201ENST00000605596 223 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AL031666.3-201ENST00000609320 1006 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 MIR1264-201ENST00000616374 69 ntBASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLCF1Q9UBD9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.59□□□□□ -1.84
CLCF1Q9UBD9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CLCF1Q9UBD9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CLCF1Q9UBD9 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.59□□□□□ -1.84
CLCF1Q9UBD9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLCF1Q9UBD9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 RNU6-317P-201ENST00000384031 107 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 HMGB3P19-201ENST00000403971 560 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 RNU2-17P-201ENST00000410290 190 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC009965.2-201ENST00000425328 970 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 NPM1P24-201ENST00000428039 894 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 FO393419.3-201ENST00000428741 282 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AL031663.1-201ENST00000437445 219 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AL357520.1-201ENST00000441557 453 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AL162388.1-201ENST00000450912 352 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 RPL23AP23-201ENST00000452590 471 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC006517.1-201ENST00000480485 328 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC006130.2-201ENST00000586202 326 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 VN1R84P-201ENST00000593697 235 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC090912.3-201ENST00000609775 533 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 MIR7154-201ENST00000620673 73 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC015726.3-201ENST00000624501 418 ntBASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CLCF1Q9UBD9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 RNU6-146P-201ENST00000384602 108 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 HMGB1P13-201ENST00000406019 642 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 MTCO3P4-201ENST00000419236 787 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 BX119904.1-201ENST00000432026 348 ntBASIC3.57□□□□□ -1.84
CLCF1Q9UBD9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms