Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.83□□□□□ -1.8
CISHQ9NSE2 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CISHQ9NSE2 AC090337.1-201ENST00000579651 2074 ntBASIC3.83□□□□□ -1.8
CISHQ9NSE2 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CISHQ9NSE2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CISHQ9NSE2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CISHQ9NSE2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC074029.4-201ENST00000624796 1859 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 RNU6-984P-201ENST00000363236 109 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 SNORA73.2-201ENST00000364946 201 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 AL359837.1-201ENST00000381357 287 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC093719.1-202ENST00000392735 373 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC006989.1-201ENST00000427212 131 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC074367.1-201ENST00000438685 1125 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 ANP32BP2-201ENST00000454525 545 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 SNORD105B-201ENST00000458770 79 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 FTH1P2-201ENST00000466086 412 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 OR5AP1P-201ENST00000529730 940 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC105036.1-201ENST00000566222 271 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC010591.1-201ENST00000603941 649 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 AC016957.2-201ENST00000616998 848 ntBASIC3.82□□□□□ -1.8
CISHQ9NSE2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CISHQ9NSE2 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CISHQ9NSE2 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CISHQ9NSE2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 AC027287.1-201ENST00000553115 1453 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 U3.39-201ENST00000408569 239 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 MTND4LP21-201ENST00000415303 295 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 DBIP2-201ENST00000419076 262 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 AC099336.2-201ENST00000422457 254 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 AL138787.1-202ENST00000437804 898 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 MTCO3P16-201ENST00000454456 754 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 AC099560.2-201ENST00000457554 255 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 AC084357.1-201ENST00000473404 255 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 HMGB3P14-201ENST00000494195 599 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 AC005726.1-201ENST00000494679 427 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 AL034408.1-202ENST00000636088 415 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CISHQ9NSE2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 AL161912.2-201ENST00000565707 3007 ntBASIC3.81□□□□□ -1.8
CISHQ9NSE2 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CISHQ9NSE2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CISHQ9NSE2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CISHQ9NSE2 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CISHQ9NSE2 MIR365B-201ENST00000362317 111 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CISHQ9NSE2 MTND4P22-201ENST00000413116 1169 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 CYCSP4-201ENST00000429682 331 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 MRPS18BP2-201ENST00000434310 759 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AL035551.1-201ENST00000446931 348 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC073387.1-201ENST00000453261 709 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 RPL7P15-201ENST00000461190 712 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC022336.1-201ENST00000475510 337 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC106707.2-201ENST00000484182 374 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 RPS3AP50-201ENST00000487064 803 ntBASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.8□□□□□ -1.8
CISHQ9NSE2 AC006116.10-201ENST00000591836 581 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms