Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNU6-759P-201ENST00000516740 103 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 MTCO1P49-201ENST00000523429 802 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 OR5AK1P-201ENST00000524837 922 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 NDUFB4P11-201ENST00000560510 395 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 ACTR3BP3-201ENST00000565577 979 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 RN7SL290P-201ENST00000578661 300 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC068790.4-201ENST00000602474 263 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 OR2AS2P-201ENST00000606902 342 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AL354760.1-201ENST00000608357 643 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 Z69908.1-201ENST00000622603 247 ntBASIC5.6□□□□□ -1.51
VTA1Q9NP79 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
VTA1Q9NP79 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VTA1Q9NP79 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTA1Q9NP79 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTA1Q9NP79 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTA1Q9NP79 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTA1Q9NP79 RNU4-24P-201ENST00000364565 139 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTA1Q9NP79 MIR298-201ENST00000401212 88 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 BOLA3P4-201ENST00000418151 400 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 LINC00993-201ENST00000420453 540 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 NPM1P24-201ENST00000428039 894 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 NRBF2P3-201ENST00000432731 865 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC129850.1-201ENST00000436203 508 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 ATP5C1P1-201ENST00000441945 895 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 DDX39BP2-208ENST00000453923 258 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 RPL23AP56-201ENST00000460778 453 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 CCDC75P1-201ENST00000469247 791 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC069304.1-201ENST00000491593 704 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 DSTNP2-201ENST00000504533 515 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 MTCO3P7-201ENST00000510008 774 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 RN7SKP96-201ENST00000516948 297 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AP001880.2-201ENST00000538233 448 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 RFPL1S-203ENST00000539579 330 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.59□□□□□ -1.51
VTA1Q9NP79 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.59□□□□□ -1.51
VTA1Q9NP79 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VTA1Q9NP79 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VTA1Q9NP79 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
VTA1Q9NP79 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
VTA1Q9NP79 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.58□□□□□ -1.52
VTA1Q9NP79 AL035079.1-201ENST00000405210 287 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AL355379.1-201ENST00000405542 640 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 RPL6P29-201ENST00000414863 865 ntBASIC5.58□□□□□ -1.52
VTA1Q9NP79 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms