Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC012020.1-201ENST00000624541 1728 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 MIR7-3-201ENST00000384898 110 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 RN7SKP53-201ENST00000411337 315 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 CYCSP4-201ENST00000429682 331 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 FGF7P3-201ENST00000454645 303 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 APOOP2-201ENST00000461561 539 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 RN7SKP209-201ENST00000516888 304 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC115621.1-201ENST00000604653 858 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 MIR7975-201ENST00000619350 68 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 SNORD39.4-201ENST00000620099 78 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 AP001005.3-201ENST00000622049 129 ntBASIC3.29□□□□□ -1.88
KIAA1549Q9HCM3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC074029.4-201ENST00000624796 1859 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC010300.1-201ENST00000600671 5134 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 SNORA9-201ENST00000384215 133 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 ZNF602P-201ENST00000405929 924 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 RPL21P10-201ENST00000463521 490 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 PRELID3BP7-201ENST00000503606 469 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC112184.1-201ENST00000505179 312 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 HNRNPKP5-201ENST00000515300 253 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AP006245.1-201ENST00000522549 120 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
KIAA1549Q9HCM3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
KIAA1549Q9HCM3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
KIAA1549Q9HCM3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.28□□□□□ -1.89
KIAA1549Q9HCM3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
KIAA1549Q9HCM3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 HSPD1P16-201ENST00000402302 394 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 HLFP1-201ENST00000402375 499 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 MOB1AP1-201ENST00000430903 535 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC010655.1-201ENST00000449336 292 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 RN7SL809P-201ENST00000482040 297 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 SETP14-201ENST00000497538 873 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 OR5B10P-201ENST00000532869 642 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC007179.3-201ENST00000604976 235 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 MIR8058-201ENST00000615737 89 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 U4.6-201ENST00000621618 127 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC244258.1-201ENST00000637553 1071 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 Z98941.1-201ENST00000407764 100 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AL035423.1-201ENST00000420331 213 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 HMGB3P10-201ENST00000434734 572 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AL356535.1-201ENST00000440335 398 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 RPL21P23-201ENST00000446654 460 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC104849.1-201ENST00000462623 405 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 TRBV12-2-201ENST00000489763 344 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AP000563.1-201ENST00000490865 758 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 LDHBP3-201ENST00000514909 822 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 RANP9-201ENST00000519957 271 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC005412.1-201ENST00000580812 1049 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC096553.1-201ENST00000605169 829 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AL355365.1-201ENST00000616480 294 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC233309.1-201ENST00000619522 751 ntBASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.27□□□□□ -1.89
KIAA1549Q9HCM3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.26□□□□□ -1.89
KIAA1549Q9HCM3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms