Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SCAF1Q9H7N4 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SCAF1Q9H7N4 IRF5P1-201ENST00000504852 2164 ntBASIC11.11□□□□□ -0.63
SCAF1Q9H7N4 CCNT2-202ENST00000295238 4491 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SCAF1Q9H7N4 AC068860.1-201ENST00000623701 3736 ntBASIC11.11□□□□□ -0.63
SCAF1Q9H7N4 AC008957.3-201ENST00000624112 2242 ntBASIC11.11□□□□□ -0.63
SCAF1Q9H7N4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SCAF1Q9H7N4 RNU6-596P-201ENST00000365395 98 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 ARSFP1-201ENST00000398758 477 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 RNU6-387P-201ENST00000411331 105 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 FABP5P2-201ENST00000439042 408 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 RN7SKP70-201ENST00000516655 271 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 CYCSP27-201ENST00000527643 293 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AL135978.1-201ENST00000553618 1266 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 RN7SL154P-201ENST00000578043 324 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AL161616.1-201ENST00000611867 286 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 LPP-208ENST00000448637 5835 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 TRIM51GP-201ENST00000534741 1350 ntBASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SCAF1Q9H7N4 RNA5SP267-201ENST00000364893 126 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RNU6-449P-201ENST00000383914 107 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 Y_RNA.592-201ENST00000410274 109 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RNU5E-9P-201ENST00000411164 104 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 PPIAP30-201ENST00000415473 519 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 UBE2V1P4-201ENST00000425374 344 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RPL30P10-201ENST00000488148 337 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 GNG2-215ENST00000557376 573 ntTSL 4 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 COX6CP3-201ENST00000580869 223 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC008521.1-201ENST00000587471 187 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC007406.5-201ENST00000570140 3170 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC103710.2-202ENST00000641454 2853 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC112243.1-201ENST00000623949 3851 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC138393.1-203ENST00000327086 343 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 Y_RNA.218-201ENST00000364218 104 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RNU5E-6P-201ENST00000365574 115 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RNU6-434P-201ENST00000384376 107 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC239367.3-201ENST00000428996 814 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RAC1P7-201ENST00000445367 377 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 TNR-IT1-201ENST00000455447 630 ntTSL 3 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 RN7SL516P-201ENST00000496127 297 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 MIR6861-201ENST00000618657 64 ntBASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SCAF1Q9H7N4 CDC27P2-201ENST00000425026 1922 ntBASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC11.08□□□□□ -0.64
SCAF1Q9H7N4 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms